Candidatus Protochlamydia naegleriophila: PNK_0653
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Entry
PNK_0653 CDS
T04212
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pnl
Candidatus Protochlamydia naegleriophila
Brite
KEGG Orthology (KO) [BR:
pnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pnl03009
]
PNK_0653 (rimO)
Enzymes [BR:
pnl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
PNK_0653 (rimO)
Ribosome biogenesis [BR:
pnl03009
]
Prokaryotic type
ribosomal protein modification factors
PNK_0653 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
TMF_TATA_bd
DUF7159
Motif
Other DBs
NCBI-ProteinID:
CUI16280
UniProt:
A0A0U5J920
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All DBs
Position
cPNK:complement(776662..778089)
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AA seq
475 aa
AA seq
DB search
MLPILKNQDSQDRSNQTVPKRDSDESSSPYFNHNGNKINFISLGCPRNLVDSEVMLGILL
KAGYEVAPSLEEADYLVINTCGFLEASRQESMDTVQDVLAQRKKTAKLIVTGCMVQTHSD
VLKTTFPGIDYLLGSGDVEGILQAVQSTQKGEIVSSARSYLEAGEVPRRLSTPKHFAYLK
IAEGCRKRCAYCVIPTIKGPLKSKSKEQILKEFNLLLNQGVKEVILIAQDLGDYGKDQGA
KKLTALLDLLQSMLEIKQDFWLRLLYLYPDEITDELIAVMKSDKRICSYLDMPIQHVNNQ
LLKSMRRMTSKEDIVEIITKLRREVPDVVIRTSLIVGFPGETEEQFEELVQFVQDHPLDN
VGIFKFSREPGSHAYDLPNQISDEVKEARYHRLMQVQKKVVKKYLKKMIGKKIPVVVEGY
HPETNLLMIGRHMGQCPDIDGQVLINDGRKVKGFGQVYTVEITDVADYDLVGHVL
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgttacccattttgaaaaatcaagattctcaagaccgttccaatcaaacggttcccaaa
cgggattcggacgaatcttcttccccttattttaatcataacggcaataaaattaatttt
atcagcttaggctgtccccgcaatttggtggatagcgaggtcatgctcggtattttgctt
aaggctggttatgaagtggctccttctttagaagaagcggattatttggttatcaatacg
tgcggatttttagaagcgtcgcgccaagaatcgatggatacggtccaagacgtactagcc
cagcgcaagaaaacagccaagctgattgtgacaggctgcatggttcaaacacacagcgac
gtgcttaaaaccacctttcccggaatcgattatttattgggatctggagatgttgaagga
atcttacaagccgtccagtcaacgcaaaaaggggaaatcgtttcttctgcaagaagctat
ttagaagccggtgaagttcctcgtcgcctttcgactcctaagcactttgcttacttgaaa
attgccgaagggtgtcgcaagcgttgtgcttactgtgtcattccaacaatcaagggacct
ttgaagagtaagagcaaagagcaaatcctgaaggaatttaatctgctgctgaaccaaggg
gtcaaggaagtcattctcattgcgcaagacttgggcgactacggtaaagatcaaggcgca
aagaagctgacagcgcttttagaccttctccaatccatgctggaaataaagcaagatttc
tggttacgtctcctctatttatatccagatgaaattacggatgaattgatcgctgttatg
aagagtgataagcgaatctgttcctatctcgacatgccgattcaacacgtcaacaatcag
ctcttaaaatcgatgaggcgcatgacttctaaagaagatatcgttgaaatcattactaaa
ttgcgccgcgaggttccggacgttgtcatccgcacgagcctgattgtcggctttcctggt
gaaacagaagagcaatttgaagaacttgttcaattcgttcaagatcaccctcttgataac
gtcggtatctttaaattttcaagagagcctggatcgcatgcttacgacctgccgaatcaa
atttcagacgaggtaaaagaggcccgttaccaccgtctgatgcaagttcaaaagaaagtc
gtgaaaaagtatctcaaaaagatgattggtaaaaaaattccagtcgtcgtcgaaggctac
catccagagacgaatcttttaatgattggaaggcacatgggccaatgtccagacattgat
ggccaggtcctcattaacgatggacgcaaggtgaaaggcttcgggcaagtctatacagtt
gaaataacagatgtagcagactatgatttagtcgggcacgttctgtaa
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