Candidatus Protochlamydia naegleriophila: PNK_0702
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Entry
PNK_0702 CDS
T04212
Symbol
dnaq3
Name
(GenBank) DNA polymerase III, epsilon chain
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pnl
Candidatus Protochlamydia naegleriophila
Pathway
pnl03030
DNA replication
pnl03430
Mismatch repair
pnl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pnl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PNK_0702 (dnaq3)
03430 Mismatch repair
PNK_0702 (dnaq3)
03440 Homologous recombination
PNK_0702 (dnaq3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pnl03032
]
PNK_0702 (dnaq3)
03400 DNA repair and recombination proteins [BR:
pnl03400
]
PNK_0702 (dnaq3)
Enzymes [BR:
pnl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PNK_0702 (dnaq3)
DNA replication proteins [BR:
pnl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PNK_0702 (dnaq3)
DNA repair and recombination proteins [BR:
pnl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PNK_0702 (dnaq3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
QSregVF_b
RNase_H_2
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
CUI16328
UniProt:
A0A0U5J963
LinkDB
All DBs
Position
cPNK:complement(834507..835229)
Genome browser
AA seq
240 aa
AA seq
DB search
MPLRAIYYDTETTGVKAERDRVIEIAAYDPLLNRRFERFVNPGFPIPPESTAIHHITDEM
VADAPSFAQIGLEFAEFCEGEVVLIAHNNDNFDYHFLRLEYERNQLSMPTHWKFLDTLKW
ARRYRSDLPRHTLQFLREIYGVAANNAHRALDDVIVLHQVFSYMIDDLEIDEVYSLLNRP
RLIQHMPFGKHQGQPLSQIPRNYIQWLVSTGAFDKPENHELKESFSRLGMLEPAGAAGAA
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgcctctaagagccatttattacgatacagaaaccaccggagtaaaggcagaaagggat
cgggtcattgaaattgccgcctatgatccccttcttaaccgccgctttgaaagattcgtc
aatcctggcttccccattcctcctgaatccactgccattcaccacattacagatgagatg
gtggcagatgctccctccttcgcccaaattggactcgaatttgccgaattttgcgaaggt
gaggtggttctgatcgcccacaacaatgacaacttcgactaccactttttacgcctcgaa
tacgagcgcaatcaactgtcaatgcccacgcattggaagtttttagatactctgaaatgg
gcaagacgttatcgttcggatcttccccgccatacgcttcaattcttgcgtgaaatttat
ggagtcgctgccaataatgcccaccgcgcactcgatgacgtgatcgttcttcatcaggtc
tttagctacatgatcgatgacttggaaatcgatgaagtatattcccttctaaatcgccct
cgcctcatccagcatatgccatttggtaaacatcaaggccaaccgctaagccaaatcccg
cgcaattacattcaatggcttgtatcaacgggtgcctttgacaagcctgaaaaccacgaa
ttgaaagagagcttctcacggctcggtatgctagaacctgcaggagctgccggggccgca
tga
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