Candidatus Protochlamydia naegleriophila: PNK_0936
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Entry
PNK_0936 CDS
T04212
Symbol
rarA
Name
(GenBank) recombination factor RarA
KO
K07478
putative ATPase
Organism
pnl
Candidatus Protochlamydia naegleriophila
Brite
KEGG Orthology (KO) [BR:
pnl00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
PNK_0936 (rarA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MgsA_C
AAA_assoc_2
AAA
RuvB_N
AAA_5
AAA_14
AAA_22
AAA_16
Sigma54_activat
Mg_chelatase
Zeta_toxin
Sigma54_activ_2
ResIII
AAA_3
AAA_18
nSTAND3
Viral_helicase1
AAA_30
AAA_17
DUF815
TIP49
AAA_28
IstB_IS21
AAA_2
AAA_33
ATPase_2
SKI
TsaE
RNA_helicase
AAA_24
Alpha-E
KAP_NTPase
Cytidylate_kin
bpMoxR
Motif
Other DBs
NCBI-ProteinID:
CUI16561
UniProt:
A0A0U5ER29
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All DBs
Position
cPNK:complement(1127473..1128744)
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AA seq
423 aa
AA seq
DB search
MKKLQPLAEELRPKNLEDVVGQDHLLGENGLITKTIQAQTPLSIILWGPPGCGKTSLARL
YAKAFNMRFVAMSAIFSGIADLKKTVKEAQDEPLFHKGTLLFVDEIHRFNKAQQDAFLPY
VENGTVILIGATAENPSFYLNGALLSRLRVLPLYPLDAFSLERLLERYEKHFAPLPLTPE
ARHLLIAWAQGDGRYLYNLVENLRHLSNEKLDVPLLEEVLQKRSPLFDKAGDQHYNLISA
LHKSVRGSDPDAALYWFTRMLEGGEEPLFLARRLIRMAVEDIGLSDPQALQLAIAAKEAY
QMLGSPEGELALAEVVVYLALSPKSNSIYQAYNEAKQVASQTGHLNPPAITLNAPTQLMK
KLGYGRGYMYDHDQPEAFSGQNYFPSELERQQFYLPVERGFERELKKRLDYFEQLRQKRI
KTI
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattgcagcctctagctgaagagttgcgcccaaaaaacctggaagatgtcgtt
gggcaagatcatctgcttggggaaaatggtttgatcaccaagacgattcaggctcaaacg
cctctttcaattattctttggggaccgccgggctgtggtaaaacatcactcgcacgcctg
tatgcaaaagccttcaatatgcgctttgtagcgatgagtgccatttttagcggcattgca
gacttaaaaaaaacggtcaaagaagcgcaagatgaacccctttttcataaaggcacctta
ttattcgtagacgaaattcatcgctttaataaggcccagcaagatgcttttttgccctac
gtcgaaaacggtacggttattttaatcggtgccacagccgaaaatccctctttttatttg
aatggagccctactatcgcgcctgcgagtcttacccctttatcccttagatgctttcagc
cttgagcggctgctcgaacgatatgaaaaacattttgcacctcttcctctaacacccgag
gctcgccatctgctcattgcttgggcccaaggggatggacgctacctttataatttagtg
gaaaatttgagacatttatcgaacgaaaaactcgatgttcctctattagaagaagtttta
caaaaaagatcgcccttatttgacaaagcgggagatcagcactacaacctgatttctgcc
ctgcacaagtcggttaggggatcggatccagatgctgctctttactggtttacccgtatg
cttgaagggggtgaagagcccttgtttctcgcacggcgtttaatacgcatggccgtcgaa
gacattggactaagcgatccgcaagcgcttcaattagctattgcagccaaagaggcctac
caaatgctcggctctccagaaggggagctcgctcttgccgaggttgtcgtttaccttgcc
ttgtctcctaagagcaactcaatttaccaagcctacaatgaagcgaagcaagtagcctcc
caaacaggacacttgaatccccctgccattactctcaatgctcctacacaactaatgaaa
aaactaggatatggaaggggttacatgtatgatcatgaccaaccagaggctttttctggc
caaaactacttcccatctgaacttgagcgccaacagttttatctgccagttgaaagaggt
tttgaacgcgagctcaaaaaacggctcgattactttgagcaactacgccagaaaagaata
aaaacgatctaa
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