Candidatus Protochlamydia naegleriophila: PNK_1010
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Entry
PNK_1010 CDS
T04212
Symbol
rnr
Name
(GenBank) ribonuclease R
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
pnl
Candidatus Protochlamydia naegleriophila
Brite
KEGG Orthology (KO) [BR:
pnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pnl03016
]
PNK_1010 (rnr)
Enzymes [BR:
pnl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
PNK_1010 (rnr)
Transfer RNA biogenesis [BR:
pnl03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
PNK_1010 (rnr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
CUI16633
UniProt:
A0A0U5J9C4
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All DBs
Position
cPNK:complement(1221852..1223318)
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AA seq
488 aa
AA seq
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MTFQGQPAIDLTELAKTAMRERDLLTEFSSDVQKAADQAPEAISFPPSTKDARQLLWCSI
DNDDSRDLDQLTYAESLDEGRFRIFIAIADVDERVPKNSLVDRHAQYNTVSVYTPTKVFS
MLPERFSTDLTSLNEGQDRLAIVVEVEVNADGSLGAHTLYQALVYNHAKLAYNSVAAWLD
GTEPMPNKIGEVAGMEAQLRLQDQITTLLKQYRHYHGALTLETLEPQAVVQNHRIVDIKI
AKKNRARDLIEDFMIAANTSTAIFLKNRELPSFRRIVRVPKRWDRIVEIAKELGEKLPDE
PDSKALDLFLIKRRSLDPLHFPDLSLTIIKLLGNGEYIVEYPNDMPIGHFGLALRDYTHS
TAPNRRYPDLITQRILKSALENKSLPYPSKELEKLAKHCTIKEDEAEKVERKMRKSAAIL
LLYSKFGEVFDAIVTGASVKGTWVRILHPPVEGKLVKGYEHKDVGDQIRVKLTNLDIENG
FIDFVRVH
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgacatttcaaggacaaccagccatcgatttaacagagcttgccaaaacagctatgcgg
gaacgagatcttttaacagaattttcctcggatgttcaaaaagcagctgatcaagcacct
gaggctatttctttccctccttctacaaaagatgcgaggcagttactttggtgttcgatc
gacaacgatgactcaagggacttagaccagctcacgtatgctgaaagccttgatgaaggg
cgatttcgaatttttattgccattgcagacgtcgatgaacgcgttcctaaaaattccttg
gtcgaccgccatgcccaatacaatacggtgtctgtctatactccgacaaaagtattttca
atgcttccagagcgattttcaaccgatcttacttcgttaaatgaaggccaagaccgatta
gcaatagttgttgaagttgaggtaaatgctgatggatctttgggggcacacaccctttac
caggcgcttgtctacaatcatgccaaacttgcctataatagcgtcgcagcatggcttgat
ggcactgagcccatgcctaacaaaatcggagaggtcgctggcatggaagcgcaactccgc
cttcaagatcagattactacgctcttaaagcaataccgtcactatcatggagcgcttact
ttagagactctggagcctcaagctgttgttcaaaatcatcgcatcgtcgacatcaaaatt
gctaaaaaaaatcgggcccgcgatttaatcgaagactttatgattgcagctaatacttca
acagctatttttttaaaaaaccgcgaacttccttcttttaggcgcattgttagggttccc
aagagatgggaccgcatcgtagaaattgcaaaagaactgggcgaaaagcttcccgatgaa
ccagactcgaaagcattggatctgtttttgatcaagcgtcgctcgcttgatccccttcat
ttccccgatctttccctgacaatcataaagcttctcggtaacggtgaatacatcgttgaa
tatccaaatgatatgccaattggtcattttggattggctttaagagactatacccattca
acagctccaaacaggcgctatccggatcttatcactcagcgcattctcaaatcagcgctt
gaaaacaagtcccttccctatccttcgaaagaactagaaaagctagctaaacactgcact
ataaaagaagatgaagccgaaaaggttgagcgtaaaatgagaaaatctgccgctattctt
cttctttactcaaaattcggagaggtgtttgatgcaattgtaacaggtgcaagcgtaaaa
ggaacctgggtgcgaattcttcaccctcctgtcgaaggcaaacttgttaaaggatacgaa
cataaggatgtcggtgaccaaattcgcgtcaaactcacaaatctggatatagaaaatggc
ttcatcgactttgtaagagttcattaa
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