KEGG   Candidatus Protochlamydia naegleriophila: PNK_1123
Entry
PNK_1123          CDS       T04212                                 
Symbol
cas3
Name
(GenBank) hypothetical protein
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
pnl  Candidatus Protochlamydia naegleriophila
Brite
KEGG Orthology (KO) [BR:pnl00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pnl02048]
    PNK_1123 (cas3)
Enzymes [BR:pnl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PNK_1123 (cas3)
Prokaryotic defense system [BR:pnl02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    PNK_1123 (cas3)
SSDB
Motif
Pfam: Cas3_HD DEAD ResIII AAA_19 AAA_22 Helicase_C UvrD-helicase HD NID NACHT
Other DBs
NCBI-ProteinID: CUI16740
UniProt: A0A0U5JD77
LinkDB
Position
cPNK:1350941..1353610
AA seq 889 aa
MIKNQFWGKLSRGPNGDVSGWHSLFAHSADVAACVEVLLTSTILNRRLAKLGGLSFLSSQ
HIARLSVIAALHDIGKFNSGFQAKCDLSLRSKWEGHQKPILDLFGSQVKEEGLLYEALDL
EKMLSWAFDQEPMLRLIIATICHHGKPLICTSNPQTYLWKPFNGLNPFEGLKMLRHFTQA
WFAEAFIAEGDVLPSNSEFHHGFAGVVMLADWMGSTVKFFPFDNGYEEDRMPFAREMARK
VIKEMGVNPARYRENMSWNAERFSDIFGFSPRPCQEVMGNLPIPLDGSISILEGETGTGK
TEAALARFFSLFKSGVVDGLYFALPTRTAATQMYSRICKIIKQSCVNEEPYLPVHLAVPG
YIHVDGKVGERILTTFDVLWDDDQETMNFRGWASENPKRFLAGSIIVGTIDQILLSTLQV
KHAHMRSACLLRHLIVVDEVHASDAYMNRLLEDVLSHHIKAGGHALLMSATLGCSARLQF
KRLFIKTSDPGFHEVSEDYEKSCCTPYPLVTCHEIGKESQAIAVHSNAREKEVQMTLLDK
IDRPQEIVKLALEAAQKGAKVLIIRNTVQDAIQTQLALEEMALSEQHSLLFQCENRLTLH
HARFAKIDRESLDHAIELSFGKERQKGGCVAVATQTVQQSLDLDADLMITDLCPIDIFLQ
RIGRLHRHDRSGSERPLEYRKAQAVVLIPEENLGQMINIRGVAKGKYGFGTVYEDLAILQ
ATWEVLQSKDYICIPSMNRLLVEEVLHPTKLQNLILRYGEPWIAHHKLNHGRLYAHKSIA
KLNMINRKVFFGEPDSLFPETIAEIKTRLGEGDVQVSFSSPFDSPFKGQITTLTIPGWQI
EEIPEDTGIKEFVFDNDRVYFSFGNKQFIYDRLGLRLNSTDNIEGHLDV
NT seq 2670 nt   +upstreamnt  +downstreamnt
atgattaaaaatcagttttggggaaagctaagtagagggccaaacggggacgtttcagga
tggcattctctctttgcgcatagtgcagatgttgctgcttgcgtagaagttcttttaact
tcgaccattctcaataggcgattagctaagctaggcgggctctcttttttatcatcccaa
cacattgctcgattaagtgtcattgcagctttacatgacatagggaaattcaatagtggt
tttcaagccaaatgcgacctttctttgcgatccaaatgggaagggcatcaaaagcctata
cttgatttatttggcagtcaggttaaagaagaaggcttgttgtatgaggcgttagattta
gaaaaaatgcttagttgggctttcgatcaagagccaatgcttcgactgatcatagctact
atatgccatcatggaaagcctttgatttgtaccagtaatcctcaaacatatctatggaaa
ccatttaacggtcttaatccttttgagggattaaagatgctgcgtcatttcacccaagct
tggtttgcagaagcttttatagcagaaggtgatgtgctgccttctaatagcgaatttcac
catggatttgcaggggttgttatgctagcggattggatgggatcaactgtgaaatttttt
ccatttgataatggatatgaggaagacagaatgccgtttgctagagaaatggctcgtaaa
gttattaaagaaatgggagtaaatcctgctagatatagagaaaatatgtcttggaatgct
gagcgtttttcggacatttttggcttctcacccagaccttgccaagaagtgatgggaaat
ttacccatacctttagatggatctattagcatcttagaaggtgagactggtacaggtaaa
acagaagctgcattagcacgctttttttctttatttaagtcgggggttgttgatgggtta
tactttgccttgccaactcgtactgctgcgactcaaatgtattcccgcatttgtaaaatc
attaagcaaagttgtgtgaatgaggagccatatcttcccgttcatttagccgttcctggc
tacattcatgtagatggtaaagtaggtgagagaattctgactacctttgatgtcttatgg
gatgacgatcaagaaacaatgaatttccgtgggtgggcttcggaaaatccgaagcgtttt
cttgcaggttccataatagttggaacaatcgaccaaattcttttatcgacacttcaggtt
aagcatgcacatatgcgttcagcatgtctcttaagacatttaatcgttgttgacgaagtg
catgcgagtgatgcgtatatgaatcgtttattagaagatgttttaagccatcatataaaa
gctggagggcatgcgttattgatgtcggctacccttggatgctcggcccgcttacaattt
aaaagactttttatcaagactagtgatccaggctttcatgaggtaagcgaagactatgaa
aaatcttgctgtacgccttatccattagtcacttgccatgaaattggaaaagaatcgcag
gctattgcagttcattcgaatgcgcgtgaaaaagaagttcaaatgactcttctcgataaa
attgataggccgcaagagattgttaaattagctcttgaagcggctcagaaaggtgcaaaa
gttttgattatacggaatactgtacaagatgccattcaaacgcagctggctttagaagag
atggcattgtccgagcagcactctttattgtttcaatgtgaaaatagacttacgctgcac
catgcgcgctttgcaaaaatagatagagagtcattggatcatgccatcgagctatctttt
gggaaagaaaggcaaaaagggggctgtgtagcagtggcaacacagactgttcagcaaagt
ttggatttggatgctgatctgatgattactgatttatgccccatcgatatttttctacaa
agaattgggcgtttgcatcggcatgaccgatctggctctgagagaccgcttgagtataga
aaagcccaagcagtagtgcttattcccgaagaaaacttggggcaaatgattaatattcgt
ggagttgctaaaggcaagtatggatttggaactgtttatgaagatctagcaatcttgcag
gccacatgggaagttttacaaagtaaagattatatctgcatcccttctatgaataggctc
ttggttgaagaggtcttgcatcctacaaagttacaaaatctaattttgcgatatggagag
ccttggattgcgcatcacaagctgaatcatggtcgtctatatgcgcacaagagcatagct
aagttaaatatgatcaatcgcaaggtgttttttggggaaccggattcattatttcccgag
acgatagccgaaattaaaactcgccttggagaaggggatgtccaagtctctttttcttct
ccttttgacagtcctttcaaaggtcagataacaacccttacgatccctggatggcaaata
gaggagataccggaagatacaggtattaaagagtttgtctttgataacgatagagtctat
ttcagctttggaaacaagcaattcatttatgaccgtttgggattgcgtttaaattctacg
gataacatagaggggcatttggatgtataa

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