Candidatus Protochlamydia naegleriophila: PNK_1516
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Entry
PNK_1516 CDS
T04212
Symbol
phrB
Name
(GenBank) Putative photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pnl
Candidatus Protochlamydia naegleriophila
Brite
KEGG Orthology (KO) [BR:
pnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnl03400
]
PNK_1516 (phrB)
Enzymes [BR:
pnl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PNK_1516 (phrB)
DNA repair and recombination proteins [BR:
pnl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PNK_1516 (phrB)
Prokaryotic type
PNK_1516 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
CUI17126
UniProt:
A0A0U5JH61
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All DBs
Position
cPNK:complement(1793152..1794570)
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AA seq
472 aa
AA seq
DB search
MVKASIIWFRQDLRLEDHPALWAALEKGGAIIPLFIWDAEQGDEWRIGAASRWWLHHSLQ
GLKAGLKKLGLTLIVRQGKPLDEIFSVISRTGADAVYWNRLYEPFMIQQDAVIKAELLKQ
GIKAQSFNGSLLFEPWTVANKQGKPFQVFTFFWKQCLKLEEVGLPLPAPQSAKRYLGKIE
SCTIESLDLLPRIKWDSGLEKAWRPGFIEARCLIEKGVEVIGDYAKSRDRPDFAGTTLLS
PSLHFGEVSPRMVWQAVKEKHDLNREGAEAYLRQLGWREFAHHLLYHFPQTPQEPLKKQF
KAFSWKSDKQALKAWQRGKTGYPIVDAGMRQLWETGWMHNRVRLITASFLVKDLLIDWLE
GAKWFWDTLVDADLANNTLGWQWVAGCGADAAPYFRVFNPITQGEKFDPEGEYVRRWVPE
LRHLPNKWIHRPWQAPEGVLVQAGVQIGVDYPTPVVDHAEARKQALDAYRRL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggttaaagcatcgattatttggtttcggcaagatctgcgtcttgaggatcacccggct
ttatgggctgcgctagaaaaaggaggagccataatccctttgtttatttgggatgcggag
caaggcgatgagtggcggataggagctgccagccgctggtggctgcatcattcgttacag
gggttgaaagcggggttgaaaaaacttggtttaacgcttattgtacggcaaggcaagcct
ttggatgaaatcttcagtgtgattagccgaacaggtgcggatgcagtttattggaatcgg
ttgtatgagccattcatgatccagcaagatgctgtgataaaggctgagctattaaaacaa
ggaataaaagctcagagctttaatggaagcctattatttgagccgtggacggttgccaat
aagcagggcaagccttttcaagtttttacattcttttggaagcagtgcttaaaattagaa
gaggttggattacctctaccggctcctcaatcagctaaaaggtatttaggcaagatagag
tcttgcacgatagagtctttggatcttttaccgcgcattaagtgggattcggggcttgaa
aaagcatggcgtccaggttttattgaagctcgatgtctaattgagaaaggcgttgaggta
attggcgactatgctaagagtcgagatcgaccagattttgctggaacgacgcttctttct
ccttctcttcattttggcgaagtttcaccgcggatggtttggcaggcggtcaaagagaag
catgatttgaaccgagaaggtgccgaagcctatttgcgacagcttggatggcgggaattt
gcccatcacttgctgtatcattttcctcaaactccgcaagagccgttaaaaaagcaattt
aaagctttttcatggaaaagcgataaacaggctttaaaagcttggcaaaggggtaaaacc
ggttatccaatcgtcgatgccgggatgcggcagctttgggagactgggtggatgcataac
cgtgtcagattgataacagcctcttttttagttaaagatttattaattgattggcttgaa
ggggcaaagtggttttgggatacgttggtggatgctgatttagccaataacacacttggg
tggcaatgggtagctgggtgcggtgctgatgcagccccgtactttcgcgtttttaatccc
atcacccaaggggaaaagtttgacccagaaggggagtatgttagaaggtgggtacctgag
ctgcgtcatcttccaaataaatggattcatcgaccttggcaagcgccagaaggtgttttg
gtgcaagctggagtgcagatcggtgtggattatccaacacctgttgttgatcatgcagag
gctcgaaagcaagcgctggatgcgtatagacgactttaa
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