Candidatus Protochlamydia naegleriophila: PNK_1881
Help
Entry
PNK_1881 CDS
T04212
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pnl
Candidatus Protochlamydia naegleriophila
Pathway
pnl03030
DNA replication
pnl03430
Mismatch repair
pnl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pnl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PNK_1881 (dnaX)
03430 Mismatch repair
PNK_1881 (dnaX)
03440 Homologous recombination
PNK_1881 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pnl03032
]
PNK_1881 (dnaX)
03400 DNA repair and recombination proteins [BR:
pnl03400
]
PNK_1881 (dnaX)
Enzymes [BR:
pnl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PNK_1881 (dnaX)
DNA replication proteins [BR:
pnl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PNK_1881 (dnaX)
DNA repair and recombination proteins [BR:
pnl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PNK_1881 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNA_pol3_gamma3
AAA_22
RuvB_N
AAA_5
AAA_16
TIP49
AAA_14
AAA_30
ResIII
PIF1
AAA_19
Glyco_tranf_2_5
AAA_24
Rad17
AAA_7
AAA_2
TsaE
Mg_chelatase
AAA_18
RNA_helicase
Sigma54_activat
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
CUI17487
UniProt:
A0A0U5JGF8
LinkDB
All DBs
Position
cPNK:2208562..2210259
Genome browser
AA seq
565 aa
AA seq
DB search
MSDYQVIARKFRPQTFKEVMGQEAIVTTLKNAIKFKRLAQAYLFCGSRGTGKTTLARIFA
KAINCQQPTEDFEPCNQCSSCREITSGSCLDVLEIDGASHRGIEDIRQINETVGYAAASG
HYKVYIIDEVHMLTKEAFNALLKTLEEPPPKVKFFFATTEAHKVLPTILSRCQRFNLNRI
PLSHIVAKLRRISEQLGADVEEEALQLLGQRAEGGLRDAESLFDQILAFSEGKITTDTVQ
SILGLMPREAYFELDQAGKEADFGKAFEIAHRIFAEGKDLSHFIEGLVDHFRHILLIQLS
GKNSPLLSLSPKEKELYEAAARLYTQEQCLDLIDYLIESTQQIRFAQSGKIALEAILLHI
MRSHFRLPIEVLVRRLSELEHAIGEQVASSPSPHSSKTILPHAASTPPPSTSHSQPTPPH
PIPPSPPKTLLQSPSPPPIVAVPLPQAQALPSAPVAAPKHPQPPPAPVQQVLAPSLFESF
VSEDPTPSRADLGLPPQRPVEPPKRVAPAPAPPKPVAVAPPAPMPPPAPATVFGTGIDKK
TPMHRYDTLFQFAAIELDGRLQRNA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattatcaagtcattgcacgcaaattccgtccccaaacatttaaagaagtcatg
gggcaagaagccattgtcacgactttaaaaaatgccattaaatttaaacgtttggcgcaa
gcctatcttttttgcggatcgcgcgggacaggcaagacgacattggcacgcatttttgca
aaagccatcaattgccagcagccaactgaagactttgaaccctgcaatcaatgttcttcc
tgcagagaaattacgagcggatcatgtttagatgttttagaaatagatggagcctcgcat
cgagggattgaagatatcagacaaatcaatgaaacggttggctatgctgcagcgtccggg
cattataaagtctacatcattgacgaagttcacatgctgaccaaagaagccttcaacgcc
ttattgaaaactctggaagagcctccccctaaagttaagtttttctttgccaccacagaa
gcacacaaagttcttcctaccatcttatcccgctgccaacgttttaatttgaaccgcatt
cctctgtctcacattgtagcgaaattgcgccgcatttccgaacaattaggagcggatgta
gaggaagaagctttacagcttcttggacagcgggcagagggcgggctaagagatgccgag
tcgctatttgaccaaatcctggccttttcagaaggaaaaatcaccactgacaccgtccaa
tctatactaggcttgatgccaagggaagcttattttgaattggatcaggctggtaaagaa
gccgattttggcaaagcctttgaaattgcccaccgcatttttgccgaaggcaaagacctc
tctcatttcattgaaggcctagtcgatcactttcgccatattttgctgattcaactctcc
ggaaaaaattcccctcttctctcattatcacccaaagaaaaagagctttacgaagcggct
gctcgcctttacacgcaggagcaatgcttagatttaattgattatctgatcgagtcgact
cagcaaatccgctttgcccagtctggtaaaattgcattggaagccattttacttcatatc
atgcgcagccattttcgcttgcctatcgaagttttagtgcgccgtttgagcgaattggag
cacgccattggcgaacaagtagcatcttcaccatcgccccattcatcgaaaaccattctg
ccacatgcggcctcaacacctcctccttccacttctcattcacagccaacaccgcctcac
cccatccctccctctccacctaaaactctgttacaatccccctctccaccacccattgtt
gccgtgcctttgccacaagcgcaggcccttccgtctgctcctgttgccgcacctaagcat
ccccagccgccccctgcacctgtacagcaggttttggcaccttccctctttgaatcattt
gtcagtgaagatcctactccctctcgtgcagatttaggattgcctccccaaagacctgtt
gaaccgcctaagcgtgtagctcctgccccagcgcctccaaagccagtagctgttgcaccg
cctgcaccaatgccgccaccggcgccagccaccgtctttggaacaggcattgacaaaaag
acgcccatgcatcgatacgacaccctctttcaatttgctgcaattgaattagatggaagg
ttgcaaagaaatgcctga
DBGET
integrated database retrieval system
