Candidatus Protochlamydia naegleriophila: PNK_2031
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Entry
PNK_2031 CDS
T04212
Symbol
gcvPB
Name
(GenBank) putative glycine dehydrogenase (decarboxylating) subunit 2
KO
K00283
glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:
1.4.4.2
]
Organism
pnl
Candidatus Protochlamydia naegleriophila
Pathway
pnl00260
Glycine, serine and threonine metabolism
pnl00630
Glyoxylate and dicarboxylate metabolism
pnl00670
One carbon pool by folate
pnl00785
Lipoic acid metabolism
pnl01100
Metabolic pathways
pnl01110
Biosynthesis of secondary metabolites
pnl01200
Carbon metabolism
Module
pnl_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pnl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PNK_2031 (gcvPB)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PNK_2031 (gcvPB)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
PNK_2031 (gcvPB)
00670 One carbon pool by folate
PNK_2031 (gcvPB)
Enzymes [BR:
pnl01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
PNK_2031 (gcvPB)
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Gene cluster
GFIT
Motif
Pfam:
GcvP2_C
GDC-P
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
CUI17635
UniProt:
A0A0U5ETP6
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All DBs
Position
cPNK:complement(2370458..2371903)
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AA seq
481 aa
AA seq
DB search
MLMTKTIFEKTQPEQHAYSLPKNTQAFQAFQPPQAYLRQTNLPLPEVSEIDLTRHFAGLA
KRNMGIDTHFYPLGSCTMKLNPRINEWCASLPGFTRTHPLAPDQMVQGNLQIIVELIQLL
CEVSGMTAGSLVPNAGAQGEFAGIQMIAAYHQEQGDFERDELLIPDNAHGTNPATATMAG
FKTIPIKTNAQGDLDLEHLKSLVSHKTAGLMLTNPNTLGLFSSVIKDIAAIVHQAGGFLY
YDGANLNSILNVARPGDMGFDVMHINLHKTFSTPHGGGGPGSGPILCNDRLKPFLPVPQV
EKVGKEYQMKWHATLSMGQLASFHGNFAIYLRAYLYAKLHGHYGLRRIAEVAVLNANYLK
HKIQKLFTVPFSEFCMHEFVVQADNYLDKGIKALDIAKRLLDYGVHAPTVYFPLIIKECM
LIEPTESESKDTLDHFVAILAQIVEEIHRDPSIVKTAPHHQSVSRLDEVLAAKKPILKHS
S
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcttatgacaaaaacgatttttgagaaaactcagcctgaacaacatgcttacagcctg
ccaaagaacacgcaggcttttcaagcctttcagccgcctcaggcctatttgcgtcaaaca
aaccttcccttgccagaggtgtccgagatcgatcttacacgacactttgccggtttggca
aagcgcaacatgggaattgacactcatttttatcccctcggcagctgtaccatgaagctt
aatccgcgcattaatgaatggtgcgcgagtttgcccggttttactcgtacccatccgctt
gcacccgatcaaatggtacaaggtaatttacagattatcgtagagcttatacagctctta
tgcgaagtgagcggcatgacggccggatcgctcgtgcccaatgccggcgctcagggtgaa
tttgctgggatccaaatgattgcagcttatcatcaagagcagggagattttgagcgggac
gagctacttattcccgacaatgcccatggaacgaatcccgccactgcgacaatggcagga
tttaagacgattccgattaaaactaatgctcaaggggacttagatcttgagcatctaaag
agcctggtttcgcataagacagccgggttaatgctcaccaatcccaatacactcgggctc
ttcagctcggttattaaagatattgccgctattgttcaccaagctggcggttttctctac
tacgatggagccaatctcaactctattttaaatgtggcccgtccaggcgacatgggattc
gatgtcatgcacatcaatttgcataaaaccttttcaaccccgcatggagggggagggcca
ggatctggacccattctttgcaacgatcgcttaaaaccctttttacctgttcctcaagtc
gaaaaagtaggtaaagagtaccaaatgaagtggcatgcgactttaagcatggggcaattg
gcttcttttcacggcaattttgccatttatctaagggcttatctctatgccaaactacat
ggtcactacggcttaagacgcatagccgaagtagcggtcctcaatgccaattatctcaag
cataagattcaaaagctctttacagttcctttttcagagttttgcatgcatgagtttgtc
gtgcaggccgataactatttggataagggaatcaaggcgctcgacattgccaagcgacta
ttggactatggcgtgcacgctccaacagtttattttccattgattatcaaagagtgcatg
ttgatcgaaccaaccgaaagtgaatcgaaagatactttggatcactttgttgccatttta
gcgcagatagtggaagaaattcatcgcgatccatcgattgtgaagacagcacctcatcat
caatctgtcagccgcttggatgaggtattagctgccaaaaagcccatactgaaacatagc
agctaa
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