Candidatus Protochlamydia naegleriophila: PNK_2418
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Entry
PNK_2418 CDS
T04212
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pnl
Candidatus Protochlamydia naegleriophila
Pathway
pnl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pnl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PNK_2418 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnl03400
]
PNK_2418 (ung)
Enzymes [BR:
pnl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PNK_2418 (ung)
DNA repair and recombination proteins [BR:
pnl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PNK_2418 (ung)
Prokaryotic type
PNK_2418 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
CUI18013
UniProt:
A0A0U5JFZ0
LinkDB
All DBs
Position
cPNK:2845001..2845711
Genome browser
AA seq
236 aa
AA seq
DB search
MQPSSFTPFVLEPSWQRVMQEELKQPYMIELAAFVEKEYATSPKPVYPPRDLIFNAFTHT
PYDKVQVVIMGQDPYHGPGQAHGLSFSVPKGIKPPPSLQNIFKELHSDIQLPTPSHGCLL
SWANQGVLLLNATLTVKQSEPLSHHGRGWERFTDAVIRSLQKRTDPVIFVLWGKSAQDKC
RFLKDNSMANRHHILTAAHPSPFSAANGFFGCRHFSKINSLLQQQGKSPIQWGLDY
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
gtgcagccttctagttttaccccttttgtcttagaaccgagctggcaaagagttatgcag
gaagagctcaagcagccttacatgatcgaactagcagccttcgtcgaaaaagagtatgcc
acctctcccaaaccggtttaccctccgcgcgacctcatcttcaatgccttcacgcataca
ccttatgacaaggtccaggtagtcatcatggggcaggatccctatcatggtccgggtcag
gctcatggcttaagctttagcgttccgaagggaataaagccccctccttccttgcaaaat
atttttaaggaactccatagcgatatccaactgccgacaccttcgcacggctgcctcttg
tcttgggccaaccaaggcgttttgctgcttaatgccactctcacagttaaacaaagcgag
cccctttcacatcatggaagaggttgggaacgctttacagacgctgtcattcgttctctg
caaaaaaggacagatccagtcatttttgttctttggggtaaatcggcccaagacaaatgc
cgcttcttaaaagacaacagcatggcgaaccgccaccacattttgactgcagcccaccca
tctcctttttcagccgcaaatggtttctttgggtgtcgccacttttcaaagatcaattcc
cttctgcagcagcaaggcaagagtcctatccaatggggattggattactaa
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