Candidatus Protochlamydia naegleriophila: PNK_p0011
Help
Entry
PNK_p0011 CDS
T04212
Symbol
ihfA
Name
(GenBank) Integration host factor subunit alpha
KO
K05788
integration host factor subunit beta
Organism
pnl
Candidatus Protochlamydia naegleriophila
Brite
KEGG Orthology (KO) [BR:
pnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pnl03032
]
PNK_p0011 (ihfA)
03036 Chromosome and associated proteins [BR:
pnl03036
]
PNK_p0011 (ihfA)
03400 DNA repair and recombination proteins [BR:
pnl03400
]
PNK_p0011 (ihfA)
DNA replication proteins [BR:
pnl03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PNK_p0011 (ihfA)
Chromosome and associated proteins [BR:
pnl03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
PNK_p0011 (ihfA)
DNA repair and recombination proteins [BR:
pnl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
PNK_p0011 (ihfA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
CUI18065
UniProt:
A0A0U5EV65
LinkDB
All DBs
Position
pPNK:complement(6133..6483)
Genome browser
AA seq
116 aa
AA seq
DB search
MSKKESRKPMTTTKKDLITHISSNNHIHPSDVQLIIQAFLDKILETLRKGQRLEFRDFGV
FEVVRRKQKIGRNPKQSDTPIVIPAHFAVKFSAGKEMKKRLEPQQNSKDPNSSHQA
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaaaggaatcaagaaaaccaatgaccaccacgaagaaagatctaatcactcat
atttcttcaaacaaccacattcaccctagtgatgttcaattgatcattcaggctttctta
gataaaattttagaaacactccgaaaaggccaacgcttagaatttagagattttggcgtt
tttgaagttgttcgaagaaaacaaaaaattggaagaaatcctaaacaatcagacacccct
attgtgatcccagcccattttgcggttaagttttcggctggtaaggagatgaaaaaacga
cttgaaccccaacaaaattctaaagatccaaatagctcacatcaagcatag
DBGET
integrated database retrieval system
