Candidatus Protochlamydia naegleriophila: PNK_p0028
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Entry
PNK_p0028 CDS
T04212
Name
(GenBank) rhs family protein
Organism
pnl
Candidatus Protochlamydia naegleriophila
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
TEN_YD-shell
DUF6531
DUF5890
Motif
Other DBs
NCBI-ProteinID:
CUI18082
UniProt:
A0A0U5JHJ8
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All DBs
Position
pPNK:complement(22175..28108)
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AA seq
1977 aa
AA seq
DB search
MFCRWMTCFFCLWSLVCFAEEDESPIDPFISPQIELATSLPTVTNQSVSVITGDWLVSVS
DFTVAGPEPLVFQRCYSKEHLKNDHLAYHWNFIQPPTVYVDRHNPKHEHSNKVHAHFAQV
TGVKTLHYVHSSGPVLSFELTPTPGLNNCRNELSGRTNLHNIALELDDDASHATSLSGAG
HLTYFRTKKSKSYIKGHLKAEFERKANGNYILYKENRIHTLNPAQSLEYNWLKWSSPQKE
RLEVEASDGKSAVYHFTCYQHGQEPRKDDPMEDLGKEVDPNAPEVGNAPKPQPAPPQTRR
YYLKRVDYSHKPHEEYEYDREPPKKLTTSPANFKLLCKRGPNGRFLKTSYDSHDRVKSQK
APVGTDETPITTHRFVYHKNPQTASGENRSGETDVFDAYGRKTVYAYNEDLLLTEVRTFV
SDQIYHTTHYIWDDHYIHSDNHWMLQTCHHILKHIFPHLYDKPKKPDTSVLDRGHAPPPP
NLNELAEEVKPAPQDEPKPTTIPVTKGHLPPHKSMQTLLDQLEPLEKPPVADFPTLVKAC
LKSHVLKVSGKGNLKGTYKQDATGYIDSARLFTYDKKGNVLQERLYGNLTGTCHSPLLLT
YHRNVQENGVEAYSKTFAYSDDQFNLPVIEQEDNGKGKLYSYIPETNLLAAQYVTNNGQI
AFRRFYDYDDNTTLVKIIKDDGKGFDRNDLSGVTERHITYMTPRTQAPFGLPERIDEMYL
NAHTGQEQLLKRVICDYTPQGYLSRQDHYDNEGQYRYSLAWEYDSHGNVISQTNAMGHVI
IKEYDVNDNLIKEKNPLQDFSTHHTYDYSNRLVRSDEIHDDGASFAISHRYDYIGNRVAT
IDRYGQETLYVYDELNRLVQTIFPPVLNGEGQVISPSTQTTYDAFNRPVSSTNANGETTT
TSYNARGKPVCVLHPDGTKERFEYNLDGTLAKSIAVNGTETRYQRDFLGRIVVEEVWADS
KLLSSQSKHYEGFRLVSSTDPEGLTTHYRYDGAGRLISEMKGNQCKELAYDSLSRLSTVT
IWFGENQTDKSIQQFTYDLLGHVIEEKLSDGNGAVLQHTSYEYDSLGNRITVAQMTEAGP
SITHTEYNSDRKPITFTDAEGNKSYIAYDYAHRNAWGQLVLKTTQTDALGKSVESVHDAM
GRVVTVTSKDAFGAVISNQQRYFDPSGNLKKVVEDVIIEGTVKSQYCYAWHHNVMGQETA
MIEALGTPQQRITRTTYNSFGQKDQTIKPSGTKILYNYDSQGRLSHFSANDRSFSYAYSY
NRNHLVTEVRDLNNKTATKRHYDELGQLIQENLDNGLSVGYHYDRAGRISVIQLPDGSTI
DYQYDAAYLRSVTRLKLGTPLYNHSYETYDQAGSLLHSQLIGQAGQANYQYDLSKRQRTI
QTPGYSQTIPDNGYDKIGRLSVKHIDDLLGQQDYRFGYTPLNQLQSEQGHRKHLYQVDSI
DNRLSKDQKSYTLDHLNQLLKDQDSSYKYDLDGNLIQKKQGGQTTTYKYDALNRLIQVKS
PQGTFDYRYDSLNRRLSKTSKKLSERYFYQGQNEIGMVDAKGQIQELRILGTGHGAELGA
AIAIEIKGRAFAPNHDHQGHVVGLIDATTGKPCEAYRYTTFGEETLINAQGAIIQTSEVG
NPWRFASKRVDPETGWVYFGRRFYDPSNGRWTTTDPLGFADGPNLYAYLHHSPLSAFDAY
GFVGEAYRDGCNVATNPNYFDGISNEYSPVFGDNAGNDAWLNVQKQEWFESAVAGFVHGC
VNFVANTCQDFHSLFLIIGMDNLDVSMEEKLLIYQAHITSQNTQIAALDGFVQETMGIDA
KNATYQAARDTSLLGLELASLAVAVTGTVKAVTYCARLSRLAPLEAKMAKCLMKQEVKSV
SKTGMSSNQGATTAIKVSEASSSTKSAADDRIWTYASPFKNKTAQELHDMFVKKGYIPKG
TDPMNGKGRYINSINNREYHIDPQSNGRYREINHVDVMRLENYESGLPKKRMAYQQD
NT seq
5934 nt
NT seq
+upstream
nt +downstream
nt
atgttttgccgttggatgacctgttttttttgtctatggagtctcgtctgtttcgctgaa
gaggatgaatctcctatcgatcctttcatctctccacaaattgagcttgcaacgtctctc
ccgactgtgacgaatcaatctgtgtcagtcattacaggcgactggctagtttcagtatca
gattttacggtagccggacccgaacctctcgtttttcaacgctgctattccaaagaacat
ctaaagaacgatcatttggcctatcattggaactttattcaaccgccaaccgtctacgtt
gatcggcacaatccaaaacatgagcattcaaacaaggtccatgcgcactttgctcaagtt
acgggtgtaaaaacgctccattacgttcattcaagtggacccgttttatcgtttgaactc
accccgactccaggcttgaataattgccgcaatgaacttagcggaaggaccaatctacat
aatattgccttagaattagatgacgatgcctctcatgccacttccctttcgggtgccgga
catttgacttacttccgcacaaaaaaaagcaagtcttacatcaaaggacacttaaaagcg
gaatttgagcgtaaagccaatggtaattatatcctttataaggagaatcgcatccacacg
ctcaatccagcacaatctcttgaatataactggttgaagtggagttcccctcaaaaagaa
agacttgaagtcgaagcaagcgatggcaagtccgctgtttaccatttcacgtgctatcag
catggccaagagcctcgtaaagatgatccgatggaagatcttggcaaagaggtcgatcca
aatgctcctgaagtcggcaatgcccccaagccacagcctgcccctccacagaccagacgt
tattatctgaagcgcgtcgattacagtcataaacctcatgaggaatatgagtacgatcgt
gaacccccaaaaaagctaacaacgagtcctgctaattttaagctgctatgcaagcgaggg
cctaatggacgcttcctgaaaacgagctatgacagtcatgatcgagtcaaatcccaaaag
gcgccagtcggaacagatgagacgccgattaccacccatcgcttcgtttatcataagaac
cctcagacggctagcggcgaaaatcgtagtggggagacagacgtattcgatgcctatggg
cgcaaaacggtctatgcctacaacgaagatcttcttttaaccgaagtaagaacatttgtt
tccgatcaaatctatcacacaactcattacatttgggatgatcactatattcactcagac
aatcattggatgctgcaaacgtgccatcacattttaaagcacatctttccccatctgtat
gacaaacccaaaaaacctgacaccagcgttttagatcgcggccatgcccctcccccaccc
aatttaaatgaattagcggaagaggttaaacccgctcctcaggatgaaccgaaacctaca
acgattcctgtcacaaaagggcatttaccacctcataaatcgatgcaaacgctgctcgat
cagttggaaccgcttgaaaaaccgcctgtcgcagattttccaacgctggtgaaagcctgc
ttgaaatctcacgtattaaaagtgtctggaaaaggcaatttaaaagggacttataaacaa
gatgccactggatacattgactcagctcgtctgttcacctacgacaagaagggcaatgtg
ctccaagagcggttatatggaaacttaacaggcacctgtcattctccacttcttttaacc
tatcacagaaacgtgcaagagaatggagtagaggcctattcaaagacctttgcctatagc
gacgatcaattcaaccttcctgtcattgaacaagaagacaatggcaaagggaaactttat
agctatattccagagacaaaccttttggcagcccagtatgtcacgaataatggccaaatc
gcttttagacgtttttatgactatgacgataacactacccttgtcaaaatcattaaggac
gatggcaaaggctttgaccgcaatgatttatctggtgtaactgagcggcatatcacctat
atgactccaagaacccaagcaccatttgggctgccagaacgtatagatgagatgtacttg
aatgctcatacagggcaagaacaactgctcaagcgcgtgatttgcgactatacgcctcaa
gggtacttgtctcgccaagatcactatgacaatgaaggacagtatcgctattctttagca
tgggaatatgatagccacggaaatgtgatttctcaaacaaatgcgatgggacacgtcatc
ataaaagagtatgacgtcaacgacaacctcatcaaggaaaaaaatccccttcaagacttt
agcacgcatcatacgtatgattactccaatcgcctggttcgttctgatgaaattcacgat
gatggagcttcgtttgcgatttctcaccgctacgattacatcggcaatcgcgtcgcaacc
attgaccgctacggccaagaaacgctgtatgtatacgacgagctcaatcgcttggttcag
accatttttcctcccgttctcaatggagaaggacaagttatctctccctccacacaaaca
acctatgatgcatttaatcgtcctgtcagctccaccaatgccaatggggagactacaaca
acgagctacaatgcacgcggtaaaccagtttgcgtgttacatcccgacggcacaaaagaa
cgatttgaatacaatttagatggcacccttgccaaatctattgctgtcaatggcacagaa
actcgttatcaaagagattttctagggcgtattgtagttgaagaggtttgggctgatagc
aagcttctcagttcgcagtctaagcactatgaaggattccgccttgtttcctcaaccgat
ccggaaggattgactactcattatcgctacgatggggccggtcgactcatatcagaaatg
aaaggaaatcaatgcaaagaattagcctatgattctttaagccgtctttcaacagtcaca
atctggtttggcgagaatcaaacagacaagtccattcaacaatttacctatgatctgctc
ggccacgtgatagaagaaaagctatccgatggcaatggagccgttttacagcacacctct
tatgaatatgacagcctcggtaatcgcatcactgttgcacaaatgacagaagctggcccg
agcatcacccatactgaatataatagcgatcgtaagccaattacttttaccgatgcagag
ggaaataagtcttatattgcctatgactatgcccatcgcaatgcatggggtcaactggtt
ttaaaaaccactcaaaccgatgccttaggaaaaagcgtagaaagcgttcacgatgccatg
ggacgagttgtcacagtcacaagtaaagatgcatttggagccgtgatatccaatcagcaa
cgctattttgatccatccggtaacctaaaaaaagtcgttgaagatgtcatcattgaagga
actgttaaaagccaatactgctatgcttggcatcacaatgtcatgggtcaagagacagcg
atgattgaagcgcttggaactccccagcaacgcattacacgaaccacgtacaattcattt
ggtcaaaaagatcaaactatcaagccaagcggcaccaagatcctttacaactatgactct
caaggacgattgagccactttagtgcaaacgatcgctccttttcttacgcctatagctat
aaccgcaatcacctcgtgaccgaagttcgcgatcttaataataaaactgcgaccaagcgc
cactatgatgagcttgggcaattgattcaggaaaatctagacaatggacttagcgtgggt
tatcactatgatcgtgcgggacgcatcagtgtcattcagctaccagatggttccactatc
gactatcagtatgacgcagcttacttgcgcagcgtgacgcgtcttaaactgggaactcct
ctttataaccatagttatgaaacctacgatcaggctggcagccttctgcattcacaactg
attggacaagctggtcaagcaaactaccaatacgatctttccaaaagacagcgaacgatt
caaacacccggctattcacaaaccattcccgataatggctatgacaaaattggtcgtttg
agtgtgaaacacatagatgatttgttaggacagcaagactatcgctttggctatacacct
ttaaatcagcttcaaagcgaacaaggacatcgcaaacatctttatcaagtcgattccatt
gataatcgcctctctaaagatcaaaagagttatacccttgatcacctgaatcagctttta
aaagatcaggatagctcttacaaatatgatctcgatggcaatttgattcagaagaagcaa
gggggtcaaacaaccacctataagtacgatgcattaaatcgcctcattcaagttaagtcg
cctcaaggaacgtttgactatcgctatgattccttaaatcgccgcctcagtaagacgtca
aaaaaactctcagaacgttacttctaccaagggcaaaatgaaatcggcatggtcgatgcg
aaaggccagattcaagaattgcgtattcttggaacaggccatggagcagagcttggcgca
gccattgccatcgaaatcaaaggacgcgccttcgcgcccaatcatgaccatcaaggccat
gtcgttggcctcattgatgccactacaggcaaaccttgcgaagcctatcgctataccacg
tttggtgaggaaactctaatcaatgcgcaaggcgctatcattcaaacctctgaagtgggc
aatccatggcgctttgccagcaagcgggtcgatccggaaacaggctgggtctacttcggc
agacgcttttatgatccaagcaacggacgctggacaacaactgatcccctcggttttgcc
gatggccccaacctctatgcctacttgcatcacagtcccctttctgcctttgatgcctat
ggcttcgtcggcgaagcgtaccgcgatggctgcaatgtggcaaccaatcctaattatttt
gatggtatctctaatgaatactcgcctgtgtttggcgataatgccggtaatgatgcatgg
cttaacgtacaaaaacaggaatggtttgagtctgcagtggctggctttgtacatggctgc
gttaattttgttgctaatacttgccaagattttcactctttattcttaattattggcatg
gacaatttagatgtttctatggaggaaaaactactcatctatcaagcccatattacctca
caaaacactcaaatagctgctctcgatggatttgtgcaagaaaccatgggtattgatgca
aaaaatgccacttatcaagcagcacgagatacaagtttacttggcttagaattagcaagt
ttggctgtagctgttactggaactgtcaaggctgttacttattgtgcaagacttagtaga
ctagcgcctcttgaagccaaaatggcaaaatgcttgatgaaacaagaagtaaaaagcgtt
tctaagacaggaatgtcttctaaccaaggtgcaacaactgctatcaaagtatcggaagct
tcttcaagtaccaaaagtgcagctgatgatcgtatctggacttatgcaagtccctttaaa
aataagacggcacaagaactacatgacatgtttgtaaaaaaaggctatattcctaaaggt
acagatccaatgaatggtaaaggaagatatataaattcgataaataatcgtgaatatcat
atcgatcctcaaagcaatggacgttatcgagaaatcaaccatgtagatgtaatgcgatta
gaaaattatgaaagtggtttgcctaaaaaacgcatggcttaccaacaagattaa
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