Halopseudomonas nanhaiensis: KEM63_00515
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Entry
KEM63_00515 CDS
T07673
Name
(GenBank) PAS domain S-box protein
Organism
pnn
Halopseudomonas nanhaiensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_4
GAF_2
PAS
PAS_9
GAF
Response_reg
HATPase_c
GAF_3
PAS_8
HisKA
SpoVT_C
Motif
Other DBs
NCBI-ProteinID:
UAW98510
LinkDB
All DBs
Position
113059..116832
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AA seq
1257 aa
AA seq
DB search
MPQAPDGQALLTAIVNSAQDFAIIATDLDGLITYWSVGAAQLLGWSESEAIGLPSRVFFT
PEDREAGRPQVEMELALCDGRAADERWHQRRDGSQFWGQGQTQPLMAGGGATIGFLKILR
DRTEQYLTQQLALMHDMPEAGPDSATDQPARGAPLVLDLHGRIKYMSEACKRVVGVSEVS
EHVDQLWSEWWSEPERQELQHAVERASQGCRGHFEGLINRAEGGPCWWEVQLLPSLNASG
EPERIIALVQDVTYDRLALGERRRQPRTHASVESIDSVAWIAQANGEIASGQPGWEALTG
QTFEQYQGLGWISAIHPADLDQWQRARRSAAAERRAFRIECRIRRRDDSWSLFSVSATPQ
LDENQTICAWIIALHDLSAHRAIRDALSLETRRLSIINRVGARLAAELDLDRLVQEATDA
GVALTAAQFGSFFYNVVDDQGESYMLYALSGAAREAFAHFPMPRNTSVFSATFQGLGVLR
SDDITLDPRYGRNAPHRGMPEGHLPVRSYLAVPVVSRSGEVLGGMLFGHELAGIFTEEHE
QLLVGIAGQAAIAIDNARLFRSAQAEVDQRRQAERLMHLHNERLRLLSAAIERMPSALSL
DALMRVISDAAEQIAGADGKALVLREGDQSRYVHSSESRWRGRSFALDACVSGLAMRERQ
TVVVADVHDDPRVQSELYRSTSVRSLIMVPILAHGEAIAAIGLFWSDTHVSDADEVATLE
AMARAAGSVFKRLEAEQALRELNETLESKVAERTADRDRMWRLSTDVMMVARFDGTMTAL
NPAWERVLGWSEAELAGRSFLSLVHPDDLAVTRDEVARLAADETTWRFENRYAHKDGSHR
WMSWTAVPADGLIQAVARDITEEKARSEALRQTEEALRQAQKMEAVGQLTGGIAHDFNNL
LTGIIGSLDMMQVRMTQGRFDTLERYLRAALGSANRAGTLTHRLLAFARRQPLAPKPVDA
GKLVMSMEELLRRTLGESVDLELIMAGGLWHALCDPHQLESAILNLAINARDAMPGGGKL
VIETCNTHLDRAYVARFPSLKPGQYICVAVTDTGTGMTPEVVERAFEPFFTTKPAGQGTG
LGLSMIYGFAQQSEGHARIYSEVGQGSTVKLYLPRTEGESELATDAASLGDAYRSLEGET
VLVVEDEPVVQALVVEVLSDLGYRTLQAADGAAGLAVMHSGQAIDLLITDMGLPGLNGRE
LAERARELRPELKVLFITGYAENATQASGFLEPGSDMLTKPFSIEAFAQRVREVTDR
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
gtgcctcaggccccggacggccaggctctgctgactgccatcgtcaacagcgcccaggac
ttcgccatcattgccacggacctcgacgggctcatcacctactggagcgtcggggcagcc
caactgcttggctggtcggaaagcgaggccattggtctgccgagcagagtgttcttcacc
ccggaggaccgggaggcgggacgcccgcaggtcgagatggaactggccctgtgtgacgga
cgggccgccgatgagcgctggcaccagcgccgcgacggttcgcagttctgggggcagggc
cagacgcagccgctcatggccggtgggggcgccacgatcggctttctgaagattctgcgt
gaccggaccgagcagtatttgactcagcagctggcgctcatgcatgacatgcccgaagcc
ggcccggatagcgctacagatcagccagcgcggggtgcgcccctggtcctggaccttcac
ggccgcatcaaatacatgagtgaggcgtgcaagcgggtcgtcggggtcagcgaggtatct
gagcatgtcgaccagctctggtcggagtggtggagcgagcccgaacgtcaggagctgcag
cacgcggtcgagcgggcaagccagggatgcaggggtcatttcgaaggcctgatcaaccgt
gccgagggtggaccgtgctggtgggaggtgcagctgctgccgagtctgaatgccagcggt
gagccggagcgaatcatagccctggtgcaggacgtcacctacgatcgtctggccctcggc
gagcggcgtcgccaaccgcgcacgcacgccagtgtcgagtcgatcgattcggtcgcctgg
atcgcccaggcaaacggtgagatcgcttccggccagcccggctgggaggccctgaccggt
cagacgttcgagcaatatcagggcctcggctggatcagcgcgatccatccagccgacctc
gaccagtggcagcgcgcccgacgctccgctgccgcggaacgacgcgcctttcgtatcgaa
tgccgcattcgccggcgggacgactcctggagcctgttctccgtcagcgcgacgccccag
ctggatgaaaaccagaccatctgcgcatggatcatcgcgctgcatgatctgtctgctcac
cgagccattcgcgatgcactgagcctggaaacgcggcgcctgagtattatcaatcgcgtc
ggcgcccgcctggcggccgagctcgacctcgaccggctggttcaggaggcgaccgatgcc
ggcgtggcgctgaccgcggcgcagttcggttcgttcttctacaacgtcgtcgatgatcag
ggtgaaagctatatgctgtatgccctgtccggcgcggcgcgtgaagcgtttgcgcatttt
cccatgccgcgcaacaccagcgtgttcagcgctacctttcaggggctgggggtcctgcgc
tcggacgatatcaccttggacccgcgttacgggcgcaacgccccccatcgaggcatgccc
gaaggacacctaccggtgcgcagttacctggcggtaccggtggtttcccggtccggcgag
gtgctcggcggtatgctgttcggccacgagctggcgggcatcttcaccgaagagcatgag
caactgctggtaggcatcgccggacaggcagccatagccatcgacaacgcgcggctgttt
cgctccgcccaggccgaggtggatcagcggcgtcaggccgagcggctcatgcatctgcac
aatgagcggctacggctgctgtccgctgccattgaacggatgccctcggcgttgtctctc
gacgcgttgatgcgggtcatctcggacgccgccgagcagatcgccggtgccgacggcaag
gcgctcgtgctgcgtgaaggcgaccagtcgcgctacgttcacagcagcgaatcgcggtgg
cggggtcggagctttgcgttggatgcatgcgtgtcgggtctggccatgcgcgagcggcag
accgtggtcgtggctgacgtgcatgacgatcctcgggtgcagagcgagttgtaccggagt
acctcggtacgcagcctgatcatggtgccgattctagcccacggtgaagccatcgccgcc
atagggctgttctggtccgacacgcatgtcagtgatgccgacgaagttgcaaccctggaa
gccatggcgcgcgctgctggcagcgtgttcaaacgtctcgaggccgagcaggcgctgcgt
gaactcaacgaaacgctggaaagcaaggtagccgagcgtactgccgatcgagatcgcatg
tggcggctgtccaccgatgtgatgatggtggcgcgcttcgatggcaccatgaccgcgctg
aacccggcatgggagcgggtgctcggctggagcgaagctgaactggctggtcgctccttc
ctgtccctcgtccatcccgatgatctggcggtgacgcgagacgaggtcgcccgccttgca
gccgatgagactacctggcgattcgagaatcgctacgcgcacaaggacggcagccaccgc
tggatgtcctggaccgcggtacccgcagacggtctgattcaggccgtggcgcgggatatc
accgaggagaaggcgcgcagcgaagccttgcgccagaccgaagaggcgctgcgccaggca
cagaaaatggaggccgtgggccagcttacgggtggcatcgctcatgatttcaacaatctg
cttaccggtatcatcggctcgctggacatgatgcaggtacgcatgacgcaaggccgcttc
gataccctggagcgctatctgcgtgccgccctggggtcggccaaccgggccgggaccctc
actcacagactgctggcattcgcgcgtcggcaaccattggcgcccaagcctgtcgatgcg
ggcaagctggtcatgtcgatggaggagctgttgcgacgcaccctgggcgagtcggtggat
ctggagctgatcatggccggtggactgtggcatgcgctctgcgacccgcaccaactggaa
agcgccatcctcaacctggcgatcaatgcccgcgatgccatgccgggcggcggcaagctg
gtaatagagacctgcaatacccatctggaccgagcctatgtggcacgcttcccgtcactc
aagccggggcaatacatctgtgttgcggtcaccgacaccggtaccggcatgacgcccgag
gtcgtcgagcgggcgttcgagccgttcttcacgaccaagcctgcgggccagggcaccggt
ctcggattgtcgatgatctacggtttcgcgcagcagtcggagggacacgcgcggatctat
tccgaggtcggacagggctccacggtcaagctttatctgccgcgtaccgagggtgaatcc
gagcttgcgacagacgcagccagcctgggcgatgcctatcgcagcctggagggcgagacg
gttcttgtggttgaggatgagcctgtcgtccaagccctcgttgtcgaagtgctgtccgac
ctcggctaccgcaccctgcaggcggcagacggggcggccggcctcgccgtcatgcatagc
ggtcaggcaatcgatctgttgatcaccgacatgggattgccgggactcaacggccgcgag
ttggctgagcgggcacgcgagctgagaccggaactcaaggtgctgttcatcaccggctat
gcagagaatgcaacgcaggccagcggcttcctggaacccgggtcggatatgctcaccaag
cccttctcgatcgaagcgtttgcccagcgtgtgcgcgaggtgacggaccgttga
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