Halopseudomonas nanhaiensis: KEM63_00645
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Entry
KEM63_00645 CDS
T07673
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pnn
Halopseudomonas nanhaiensis
Pathway
pnn00300
Lysine biosynthesis
pnn00470
D-Amino acid metabolism
pnn01100
Metabolic pathways
pnn01110
Biosynthesis of secondary metabolites
pnn01120
Microbial metabolism in diverse environments
pnn01230
Biosynthesis of amino acids
Module
pnn_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pnn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KEM63_00645 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KEM63_00645 (dapF)
Enzymes [BR:
pnn01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
KEM63_00645 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
UAW98532
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All DBs
Position
complement(140331..141161)
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AA seq
276 aa
AA seq
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MLLRFTKMHGLGNDFMVIDLVTQHAQLSPRLIRQWSDRHTGIGFDQLLVVEPPGQPDVDF
RYRIFNADGSEVEQCGNGARCFARFVQDKRLTAKSEIHVETAGGPITLSVRDDGQVTVNM
GAPRFDPPQIPFQAEQEALTYPLQVGGQVYDVAAVSMGNPHCVTLVNDLQQLPLAELGPL
FEAHPRFPRRVNAGFMQVVDSHHARLRVYERGVGETQACGTGACAAAVAGIRTGHLVSPV
KIELPGGILHIEWAGPGEPVMMTGPAVRVYEGQIRV
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctgttgcgatttaccaagatgcacgggctgggtaacgatttcatggtcatcgatctg
gtgacccagcacgcccagctgtcgcccagactcatcaggcaatggagtgaccggcacacc
ggcatcggcttcgatcagctgctggtggtggagccgccgggccagcccgatgtcgatttc
cgttatcggatcttcaacgccgacggcagcgaggttgaacagtgcggcaacggtgcgcgc
tgcttcgcccgcttcgtccaggacaagcgcctgacggccaagtcggagatccacgtggag
accgccggcggcccgatcaccctgtcggtgcgtgatgacggtcaggtaaccgtgaacatg
ggcgcaccgcgtttcgatccgccgcagatcccgtttcaggccgagcaggaagcgctgacc
tatccgctgcaggtaggtggccaggtctatgacgtcgccgccgtgtcgatgggcaatccg
cactgcgtgacgttggtcaatgatctgcaacaactgccactggccgaactcggcccgctg
ttcgaggcgcatccgcgcttcccccggcgggtcaacgccgggttcatgcaggtggtcgac
agccatcatgcgcgactgcgggtgtacgaacgcggcgtcggcgagacccaggcctgcgga
accggcgcctgcgcggcagccgtggcaggcatacggaccgggcatctggtttcaccggta
aagatcgaactgcccggcggcatcctgcatatcgagtgggcaggtcctggcgagccggtg
atgatgaccggcccggccgtgcgggtttacgaggggcagatacgcgtatga
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