Halopseudomonas nanhaiensis: KEM63_04540
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Entry
KEM63_04540 CDS
T07673
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
pnn
Halopseudomonas nanhaiensis
Pathway
pnn02020
Two-component system
pnn02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pnn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KEM63_04540
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KEM63_04540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pnn02022
]
KEM63_04540
02035 Bacterial motility proteins [BR:
pnn02035
]
KEM63_04540
Two-component system [BR:
pnn02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
KEM63_04540
Bacterial motility proteins [BR:
pnn02035
]
Flagellar system
Flagellar assembly proteins
Others
KEM63_04540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
AAA_2
HTH_20
AAA
FleQ
HTH_30
Mg_chelatase
HTH_28
MerR
HTH_23
MCM
AAA_19
AAA_3
Sigma70_r4_2
HTH_24
nSTAND3
HTH_PafC
AAA_22
HTH_29
AAA_7
HTH_17
HTH_1
HTH_Mga
HTH_11
Myosin_head
Motif
Other DBs
NCBI-ProteinID:
UAW99243
LinkDB
All DBs
Position
1008707..1010098
Genome browser
AA seq
463 aa
AA seq
DB search
MTARPRILLVEDDRNLREALSDTLTLGGYEHIEAPDAETALRLLKREAVSLVVSDVNMPG
MDGHMLLRQVREHHPQVPVLLMTAYGTVQQAVVAMRDGAVDYLVKPFEPRALLDLVAQHS
QGRLPVSAAAEGPVAVEPASQQLLQLAARVAASDSTVLISGESGTGKEVLARYIHQQSPR
AAQPFIAINCAAIPDNMLEATLFGHEKGAFTGAVAAQPGKFEQANGGTILLDEISEMPLG
LQAKLLRVLQEREVERVGGRKLIQLDIRVVATTNRDLLAEVAAGRFREDLYYRLGVFPLQ
WQALRTRPGDILPIAERLLDKHSRKMNQPRPRFSSEAAQAMTTHTWPGNVRELDNAVQRA
LILQQGGVIRPQDLCLDTAPGAAIFPTEFQSQTAPAFDGPVNAPSPSLGEGVKEREFQLI
MDVLRAEGGRRKEAAERLGISPRTLRYKLAQMRDAGFDVAGGA
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgactgccagaccccgcattctcctcgtagaagatgaccgcaacctgcgcgaagcgctg
tccgatactctgaccctgggcggttatgagcacatcgaagcgcctgatgcggaaaccgcg
ttgcggttgctcaagcgcgaagcggtttcgcttgtggtgagtgacgtcaacatgccgggc
atggacgggcatatgctgctgcgtcaggtgcgcgaacaccatccgcaggtgccggtgctc
ctgatgacagcgtacggaaccgtgcagcaggcggtggtggcgatgcgcgacggggcggtg
gattacctggtcaagccgttcgaaccccgggccctgttggatcttgttgcgcagcacagc
cagggccgtttgcccgtctcggcagcagcagaagggccggtggctgtagagcctgccagt
cagcagctgctgcagcttgccgcacgcgttgccgccagcgattcgacggtgctgatttcg
ggcgagtcgggtaccggcaaggaggtgctggcgcggtatatccaccagcaatcgccgcgt
gcggcgcaaccgttcatcgcgatcaactgcgcggccattccggacaacatgctcgaggcc
acgttgtttggacacgaaaagggcgccttcactggtgccgtcgctgcgcagcctggcaag
ttcgaacaggccaacggcggcactatcctgctcgacgagatatccgaaatgcccctaggg
ctgcaggccaagctattgcgtgtcctgcaggagcgcgaagtcgagcgggtaggtgggcgc
aagctcatacagctggatatacgcgtcgtcgccaccaccaaccgcgatttgttggccgag
gtcgctgccggtcgatttcgcgaagatctttactaccgcctgggcgtctttccgctgcaa
tggcaagcgctgcgcacgcgccccggcgatatcttgccgatcgccgaacgcctgctcgac
aagcacagccgcaagatgaaccagcccaggccgcgattttcatccgaagcagcgcaggcc
atgacgactcacacttggcctggaaacgttcgcgagctggacaatgccgtacagcgtgcg
ctgatcctgcagcagggaggggtgatcagacctcaggatctctgcctggataccgcgccg
ggcgctgccatttttccgacagagtttcagtcgcagacggctccggcgttcgatgggccc
gtgaatgcgccatcgccgagtctgggcgaaggcgtcaaggagcgcgaattccagctgatc
atggatgtgctgcgcgctgaaggtggccgccgcaaggaagccgcggaacggttgggcatc
agcccccgcacactgcggtacaagctggcgcagatgcgcgatgcgggcttcgacgtggct
ggaggagcctga
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