Halopseudomonas nanhaiensis: KEM63_06855
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Entry
KEM63_06855 CDS
T07673
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
pnn
Halopseudomonas nanhaiensis
Pathway
pnn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pnn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
KEM63_06855
09124 Replication and repair
03420 Nucleotide excision repair
KEM63_06855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pnn03021
]
KEM63_06855
03036 Chromosome and associated proteins [BR:
pnn03036
]
KEM63_06855
03400 DNA repair and recombination proteins [BR:
pnn03400
]
KEM63_06855
Enzymes [BR:
pnn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
KEM63_06855
Transcription machinery [BR:
pnn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
KEM63_06855
Chromosome and associated proteins [BR:
pnn03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
KEM63_06855
DNA repair and recombination proteins [BR:
pnn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
KEM63_06855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
Helicase_C
DUF7711
Motif
Other DBs
NCBI-ProteinID:
UAW99676
LinkDB
All DBs
Position
complement(1521621..1523927)
Genome browser
AA seq
768 aa
AA seq
DB search
MNYRIAVRALCEFTAKEGDLDLRFTPAPTAQEGIAGHKTVVLRRGAGYLSEVALAGEYPG
LLVTGRADGYDEQANRLEEIKTHRGDVARIPQNHRLLHWAQAKVYGHLLCAEQSLDDIEL
AVVYFNVISQKETVFRERFDAATLRTFFELQCSRFVAWARQEDAHRQARNQSLERLQFPF
PSFRKGQRQLAEAVYRAARDGDALMTQATTGIGKTLATLFPQLKAFPGQNLDRLFFLTAK
TPGRRLALDALAALRDQEEHMPLRVLEHVARDKACEYPDRACHGESCPLATGFYDRLPAA
RNEALASNWLTQQQVREVAIRHQVCPYYLSQELCRWVDVVVCDYNYYFDMTALLFGLTVM
NEWRVTLLVDEAHNLVDRGRGMYSAELDQGRFNALRKVAPAPLKSSLDRVNRHWNQLHKE
QQVDYQIYPAIADLFILSLQKAVSAITDHLTDQPTGNDADLLRFYLDAMLFTRLAETYGD
HSLFDITRHARPGQRTLSTLCLRNIVPAPYLATRFAHAHSVTLFSATLSPSRYYRDLLGL
PSDTRWLEVESPFSAEQLDVSIARNVSTRYQHRGGSLDAIGSVLAARYRFMPGNYLAFFS
SYAYLQQVIDHVRIHHPDVPVWEQSRNMSEAERQAFLDRFTDTSQGIGFAVLGGAFGEGI
DLPGARLIGAFIATLGLPQVNAVNEEVRARMQTMFGNGYDYAYLYPGLQKVVQAAGRVIR
TTSDRGMVMLLDDRFSQAQVRSLLPGWWQVSSFAVTQSPRTRKPLPQF
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgaactaccgcatcgcagtgcgcgcactctgcgagttcacggccaaggaaggtgacctg
gacctgcgcttcaccccggctcccaccgcgcaggaaggcatagccgggcacaagacagtg
gtactgcgccgtggcgcgggttatctcagcgaggtcgcgctggccggcgaatacccgggt
ttgctggtcaccggacgcgccgacggatacgacgagcaggccaatcggctggaggagatc
aagacgcaccgtggggacgtcgcgcggatcccccagaatcaccgtctgttgcactgggcg
caggccaaggtttacggccatctgctctgcgctgaacagagcctcgacgacatcgagctc
gccgtcgtttacttcaatgtgatctcgcagaaggaaaccgtctttcgcgaacgtttcgac
gccgccacgctgcgcacgttcttcgagctgcagtgctcgcggttcgtcgcctgggcacgc
caggaggatgcacaccgtcaggcgcgcaatcagagccttgagcgtctgcagtttcccttc
cccagcttccgcaagggccagcgccaactggccgaggcggtgtatcgtgctgcacgcgat
ggcgatgccttgatgacccaggcaaccaccggaatcggcaagacacttgctacgctgttc
ccacagttgaaggccttccccgggcagaatctcgatcgcctgttctttctgacagccaag
acaccaggccggcgtctggcgcttgatgcgctcgcggcgctgcgtgatcaggaggaacac
atgccgctgagggtgctggagcatgtcgcccgggacaaggcctgcgaatatcccgaccgc
gcctgccacggtgaatcatgcccacttgcaaccgggttctatgaccggctgcccgccgca
cgcaatgaggcgctcgccagcaactggttgacccagcagcaggtgcgcgaggtggctatc
aggcaccaggtgtgtccctattatctgagccaggagctgtgccggtgggtcgatgtggtg
gtctgcgactacaattactacttcgacatgaccgccctgctgttcgggctgacggtgatg
aacgaatggcgggtgaccctgctggtggacgaggcgcacaatctggtcgatcgcgggcgc
ggcatgtactccgccgagctcgatcagggacgtttcaacgcgttgcgcaaggttgcgccg
gctccactcaaatcgtcgctggacagggtcaaccgccactggaatcagctgcacaaggaa
cagcaggtcgattaccagatctatccggcgattgccgatctgttcattctcagcctgcag
aaagcagtcagcgccatcaccgatcatcttaccgaccagccgaccggcaacgatgctgac
ctgctgcgcttctatctcgacgccatgctgttcacccggctggccgagacgtacggcgat
cattcactgttcgacatcacgcggcatgcacgtcccggccagcgtacgctgtcgacgttg
tgtctgcgcaacatcgtacctgcgccgtatctggcgacgcgtttcgcccatgcccacagt
gtcactctgttctccgccacattgagtccttcccgctactacagggacctgctaggcctg
ccgtccgacacacgctggctggaggtggagtccccgttttccgccgagcagctggacgtc
agcatcgcgcgcaacgtctccactcgctaccagcaccgcggcgggagcctggatgcgatc
ggcagcgtgctggcggcgcggtatcgcttcatgcccggtaactatctggcgttcttcagc
agctacgcctacctgcagcaggtcatcgatcatgtgcgtatccatcatcctgatgtgccg
gtctgggagcagtcgcgcaacatgagcgaagccgagcgtcaggcgtttctcgaccgcttc
accgacacctcgcaggggatcggctttgcggtcctgggtggcgctttcggtgaaggcatc
gacctgcccggcgcgcggctgatcggtgcgttcatcgctacgctcgggctaccgcaggtc
aatgcggtgaacgaggaagtccgggcccgcatgcagacgatgttcggcaacggctacgac
tatgcttacctgtatcctggtttgcagaaggtggtccaggccgctggccgggtcatacgt
accacctcggaccggggaatggtgatgttgctcgatgatcgcttcagccaagcacaggtc
cgaagcctgctgcctggctggtggcaggtgtcctccttcgccgtgactcagtcgccgcgt
actcgcaagccccttccgcagttctga
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integrated database retrieval system
