Pseudomonas nanhaiensis: KEM63_08030
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Entry
KEM63_08030 CDS
T07673
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pnn
Pseudomonas nanhaiensis
Pathway
pnn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pnn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KEM63_08030 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnn03400
]
KEM63_08030 (xthA)
Enzymes [BR:
pnn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
KEM63_08030 (xthA)
DNA repair and recombination proteins [BR:
pnn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
KEM63_08030 (xthA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
UAW99899
LinkDB
All DBs
Position
complement(1792449..1793264)
Genome browser
AA seq
271 aa
AA seq
DB search
MKFVSFNINGLRARPHQLSEIVARHAPDVIGLQETKVDDTSFPYDDVAALGYHVHFHGQK
GHYGVALLTRERPVWVAKGLPSDTPEAQCRLISAELPCPDGKSVVVFNGYFPQGESREHP
VKFPAKTRFYADLQAHLEQRFSPEQRLVLMGDLNISPEDCDIGIGAENARRWLRTGKCSF
LPEEREWLQRLKDWGLVDTFRRTYPDSDDRFSWFDYRSRGFEAEPKRGLRIDLVMASSGL
IDSCVEAGIDYDIRAMEKPSDHAPVWASFRV
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcgtttccttcaatatcaacggcttgcgcgcaagacctcatcagttatctgag
atagtcgcgcgccacgctcccgacgttatcggcctgcaggagaccaaggtcgacgacacg
tccttcccctacgacgatgtggcggcgctcggctatcacgttcacttccacgggcagaag
ggccactacggcgtagcgctgctgacgcgggaacgaccggtctgggttgccaagggattg
ccaagcgatacgcctgaggcgcagtgccgactgatctctgcggagctaccctgcccggac
ggcaaatccgtggtggtgttcaacggatacttcccacaaggtgagagccgggagcatccg
gtcaagttcccggccaagacacgtttctacgcggatctgcaggctcatctcgagcaacgc
ttcagcccggagcaacgattggtactgatgggggacctgaacatttcaccggaagattgc
gacataggcatcggcgcggaaaacgcccgtcgctggttgcgtacagggaagtgcagtttc
ctgccggaggagcgcgaatggctgcagcgattgaaggactggggtctggtcgacacattt
cgccgcacgtacccggatagcgacgaccgcttcagctggttcgactaccgaagccgcggc
ttcgaggctgaacccaagcgcgggctccgcatcgacctggtcatggccagcagcgggctg
atcgactcttgcgtggaagcaggaatcgactacgacatccgcgccatggaaaagccatcc
gaccatgctcccgtctgggcaagcttcagggtctaa
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