Halopseudomonas nanhaiensis: KEM63_10475
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Entry
KEM63_10475 CDS
T07673
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pnn
Halopseudomonas nanhaiensis
Brite
KEGG Orthology (KO) [BR:
pnn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pnn03016
]
KEM63_10475
Enzymes [BR:
pnn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
KEM63_10475
Transfer RNA biogenesis [BR:
pnn03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
KEM63_10475
Prokaryotic type
KEM63_10475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
UAW97252
LinkDB
All DBs
Position
2342780..2343751
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AA seq
323 aa
AA seq
DB search
MDLLFLGTSSGTPTRSRNVSGLALIEETGKRWYLIDCGEATQHQLLRTPLSLHGLTAIFI
THVHGDHCYGLPGLLASAGMSGRREPLDIIAPAGIENWILATLRMSHTHLPFELRFHATE
QLAEWRNVSLYVERGELSHRVPCFGYSFTETRPDPKLDVDKLVRSGVPRGPIWGELARGK
DAVLDGRRLRSEEYLTFGRPPRRIVVGGDNDRPELLSDLCRSADVLVHEATYTQDIAARG
KTHFGHSTAISVASFAEAMTIPNLLLTHFSARYQTNPERSPSIEDLRCEASSVYGGRLFL
AEDLARYRLGRDGRVEQLAGPPG
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggatctgttgtttcttggcacgtcttcaggcacacccacccgctcgcgcaatgtcagc
ggcctggcgctgattgaagagaccggtaaacgctggtatctgatcgattgcggcgaagcc
acgcagcaccagttgcttcgcactccgctttcgttgcatggcctgacggcgatcttcatc
acgcatgtgcacggcgatcactgctacggcttgcccggcctgctcgcgagtgccggtatg
tcgggccgccgtgaaccactggacatcatcgcgccagcgggcatagaaaactggattctt
gccacactgcgcatgtcgcacacacatctgccattcgagctgcgctttcacgcaaccgag
caactcgccgaatggcgcaacgtcagtctttacgtcgaacgcggtgagttgtctcatcgt
gtaccctgttttggatacagctttaccgagacccggcccgacccgaagctcgatgtcgac
aagctggtccgaagcggagtgccgcgaggccccatctggggcgagttggctcgagggaag
gatgccgtactggacggccgaaggctgcgaagcgaggagtatctgacgtttggccgacct
ccgcgacgcatcgtcgtagggggcgataacgaccgaccggagcttctgagcgacctgtgc
cgctcagcggatgtgctggtccatgaggcgacctatacacaggatatcgctgcccgaggg
aagacccacttcggacacagcaccgccatctccgttgccagctttgccgaagcgatgacg
atccccaatctgctattgacgcacttcagcgcccgctatcagacaaaccccgagcgcagc
ccatcgatcgaggacctgcgctgcgaagcatcatcggtgtacggcggacgcttgtttctc
gctgaggatctggctcgctaccgcctgggccgcgatgggcgagtcgaacagttggcaggt
ccgccggggtga
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