Halopseudomonas nanhaiensis: KEM63_10910
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Entry
KEM63_10910 CDS
T07673
Symbol
lapB
Name
(GenBank) lipopolysaccharide assembly protein LapB
KO
K19804
lipopolysaccharide assembly protein B
Organism
pnn
Halopseudomonas nanhaiensis
Brite
KEGG Orthology (KO) [BR:
pnn00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99986 Glycan metabolism
KEM63_10910 (lapB)
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Gene cluster
GFIT
Motif
Pfam:
TPR_16
TPR_14
TPR_7
TPR_19
Zn_ribbon_LapB
TPR_12
TPR_2
TPR_1
TPR_8
TPR_11
TPR_CcmH_CycH
NatA_aux_su
DnaJ_CXXCXGXG
DDE_Tnp_1_4
DUF6203
RL11D
Motif
Other DBs
NCBI-ProteinID:
UAW97332
LinkDB
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Position
complement(2424694..2425896)
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AA seq
400 aa
AA seq
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MQELLFLALFVVALAIGWLLGRREAIKVGFLVKPHGSALDRQYFIGLNYLLNEQPDEAIE
TFIRALEVNPETVETHIAIGKLFCQRGDVERAIKVHQNLLARPNLTREQGDRVQFELARD
YLAVGLHNRAQRLLEELIEAKSPLRAEALADLVRIYERERDWSNAVEVGRKLVKERPAFA
VTLAHYHCEIAQAALRRDEIQVARRHLKDALASHRACTRAMIMLAELEQGQDNPIEVAHW
LEQLAEHDGDLVPQVLPLARRCADNGALDLSAYLDGVIGESDPPQVETILARADQYQREQ
GVIEASRYVVANIQQQPSLHGLRYLIDLHSDQVGSRGRENLLILRGVVEGLLQDKHQYRC
QACGFSGRRLHWQCPTCHGWSTIRPIKTPVPVAAGKPEHL
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaactgttgttcctcgccctgttcgtggtggcccttgcaattggatggttgctc
ggccgccgcgaagcgatcaaggtcggcttcctggtcaaaccccatggtagtgctcttgat
cgccagtatttcatcggcttgaactatctactcaacgaacaacccgatgaggccatcgaa
acctttatccgcgcgctcgaggtcaatcccgagacagtcgaaacgcacatcgcgatcggc
aagctcttctgtcagcggggcgatgtggagcgcgcgatcaaagtgcatcagaaccttctt
gcgcgccctaacctgacacgcgagcagggcgatcgggttcagttcgagcttgcccgggac
tatctcgcggtcggcctgcacaaccgggctcagcgattgctggaagagctgatcgaggca
aaatcgcctctgcgcgccgaggccctggctgacctggtacgaatctacgagcgtgaacgg
gactggtcaaacgccgttgaagtaggccgcaagctggtcaaggagcgcccggcctttgcc
gtgacactggcgcactaccattgcgagatcgctcaggccgcgctgcggcgggacgagata
caggttgcgcgtcgacatctcaaggacgcactggcgtcgcaccgggcctgcacgcgcgcg
atgatcatgctggctgaactcgagcagggccaggataacccgatagaagtggcgcattgg
ttggagcaactcgccgaacatgatggcgatctggtcccccaggtcttgccgctcgcacga
cgctgcgcggataatggcgccctagatctgagcgcttatctggacggcgttatcggcgag
agtgatcccccgcaggtggaaacaattctggcgcgtgcggaccagtaccaacgcgagcag
ggcgttatcgaagcgagcagatacgtcgtagccaacatacagcagcagccgtccttgcac
ggtttgcgatatctgatcgatttgcatagcgaccaggtaggctctcgcggtcgcgaaaat
ctgttgattctccgcggtgtggtcgagggattattgcaggacaagcatcagtaccgttgc
caggcttgcggcttctcgggacgccgtcttcactggcaatgcccaacctgccacggttgg
tccacaatccggccgataaagacgccggtcccggttgccgctggcaagccggagcacctc
tag
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