Pseudomonas nanhaiensis: KEM63_11425
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Entry
KEM63_11425 CDS
T07673
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pnn
Pseudomonas nanhaiensis
Pathway
pnn03030
DNA replication
pnn03430
Mismatch repair
pnn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pnn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KEM63_11425 (dnaX)
03430 Mismatch repair
KEM63_11425 (dnaX)
03440 Homologous recombination
KEM63_11425 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pnn03032
]
KEM63_11425 (dnaX)
03400 DNA repair and recombination proteins [BR:
pnn03400
]
KEM63_11425 (dnaX)
Enzymes [BR:
pnn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KEM63_11425 (dnaX)
DNA replication proteins [BR:
pnn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KEM63_11425 (dnaX)
DNA repair and recombination proteins [BR:
pnn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KEM63_11425 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
AAA_22
RuvB_N
AAA_5
AAA_18
AAA_2
ResIII
AAA_16
AAA_14
AAA_30
AAA_19
PIF1
Rad17
nSTAND3
TsaE
DUF3646
AAA_7
SKI
Herpes_Helicase
ARMC6
AAA_28
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
UAX00067
LinkDB
All DBs
Position
complement(2551622..2553709)
Genome browser
AA seq
695 aa
AA seq
DB search
MSYQVLARKWRPRLFREMVGQTHVLQALINALDNNRLHHAYLFTGTRGVGKTTIARILAK
CLNCEVGVSSEPCGICSACREIDEGRFVDLIEVDAASRTKVEDTRELLDNVQYAPSRGRF
KVYLIDEVHMLSSHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFSLKNMPP
ERVVEHLRHVLGEESIGFDEESLWLLGRAADGSMRDGLSLTDQAIAFGNGTLQASQVRSM
LGTIDHGQVFGLLEALAAHDARALLGAVAELAEQGADFAGVLSELISTLQRLAIAQVLPD
GVDNSQGDRERVVELAGRMSAEDVQLFYQLALHGRRDLPLSPDPRGGFEMAVLRMLAFRP
VAMESATAPPPGPTDPGSGKSVGLSQARAEPQDTGPAASPASMSTAPVIAAGPVASPRRD
EAMAQLRSGLGQTAGARSVESARPLSATPPPEPSATAPVAPPAAASVDQVDERALTPPEV
ATASRPAPSRPLNVSTPVKPPVNEPPQEWLEAAPDEAPEAQDEDDEEPLDVSGYLNEWDV
ADAVEIDVPVIDPGDEVSELPVATGLAAQWLEQFPRLALSGLTQSIAAHCQLMSDEGGEW
QLRLDPGHSALYNENHRQRIERALCDLLEREVRLSVEVRTPDQETPAVAAARRRVARQRE
AEASIQADPLVQRLLSEFAAQICDDSIRPLDASTT
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggtattagcccgcaaatggcgtccccgtctgttccgcgaaatggtcggg
cagacccatgttctgcaggcactcatcaatgcgctggacaataaccggctgcaccatgct
tacctcttcaccggtacccgcggagttggcaagacgaccatcgcgcgcatcctggcgaaa
tgcctgaattgcgaggtcggtgtcagctccgagccatgcggcatctgttcggcgtgccgc
gaaatcgatgaggggcgtttcgtcgaccttatcgaagtcgacgctgccagtcggaccaag
gtcgaggacacccgcgaactgctcgacaacgtgcagtacgctccctcgcgtgggcgtttc
aaggtgtacctgatcgacgaagtgcacatgctctccagtcacagtttcaatgccctgttg
aagacgctggaggagccgccggagcatgtgaagttcctgctcgcaaccaccgatccgcag
aagttgccggtcaccattttgtcccgctgcctccagttttcgctgaaaaacatgccgccg
gaacgcgtcgtcgaacatcttcgccacgtgctgggtgaggaatcgatcggttttgacgag
gagtcgctctggctgctgggtcgtgcggcggatggctccatgcgtgacgggctcagcctg
accgaccaggccatcgccttcggaaacggaacgttgcaggcgagccaggtcagaagcatg
ctcggcaccatcgatcatgggcaggtgttcggactgctcgaagcgcttgctgcacatgat
gcaagagcgcttctcggcgcggtcgccgaactggccgaacagggtgccgacttcgccggg
gtactgagtgaattgatttctaccctgcagcgtctggccatcgcccaggtactgccggac
ggtgtcgacaacagccagggcgatcgtgagcgcgtcgtggagctggctggacgcatgagc
gcagaagatgtacagctgttctatcagcttgcgctacatgggcgtcgcgatctgccgttg
tcaccggatccgcgcggcggcttcgaaatggccgtgctgcgaatgctggcgtttcgcccg
gtagcgatggaatcggcgaccgcgccaccgcccggtccgacggatcctggctcgggaaag
tcggtggggctcagccaggccagggctgaaccccaggataccggtccagcggccagtcct
gcctcgatgtctacggcaccagtgattgctgctggtcccgtggcgtccccacgccgcgac
gaagccatggcacagctgcgctccggtctgggccagaccgctggggcgcgtagcgttgaa
tcagccagaccgctttctgcgacaccaccgccggagccgtctgctaccgcgcctgtggcg
cccccggcggcagcatccgtagaccaggttgacgagcgcgcactcactccgcccgaggtg
gcgacagcatccaggccggctcccagccgcccgttgaacgtgagcacgccggtcaagccg
ccggtcaacgaacccccccaggaatggctggaggccgcgcccgacgaggcgcctgaagcg
caggacgaggatgacgaggaaccgcttgacgtcagcggctatctcaacgaatgggatgtg
gccgacgcggtggagatcgacgtgcctgtcatcgacccgggtgacgaggtcagcgagctg
ccggttgctaccggcctggctgcgcaatggctggaacaattccctcgcctggccctcagc
ggtctcacgcaaagcattgcggcgcactgtcagttgatgagtgatgagggaggggagtgg
caattgcggctggacccgggccacagcgcgctgtacaacgagaatcaccgccagcggatc
gagcgtgcactgtgcgatctgcttgagcgggaggtgcgcttgtccgtcgaggtcaggacg
cccgatcaggaaacccctgcggtggccgcggcgcgtcgacgggttgcccggcagcgcgag
gcagaagcgagcattcaggccgatccgctggtacagcggctgctgagtgagtttgccgca
cagatttgtgacgacagcatccgtccgctggatgcttctacaacttga
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