Halopseudomonas nanhaiensis: KEM63_11980
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Entry
KEM63_11980 CDS
T07673
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
pnn
Halopseudomonas nanhaiensis
Pathway
pnn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pnn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KEM63_11980 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnn03400
]
KEM63_11980 (ruvB)
Enzymes [BR:
pnn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KEM63_11980 (ruvB)
DNA repair and recombination proteins [BR:
pnn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KEM63_11980 (ruvB)
RecFOR pathway proteins
KEM63_11980 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_3
TIP49
nSTAND3
AAA_22
AAA_17
AAA_16
Mg_chelatase
AAA_28
Sigma54_activat
RNA_helicase
AAA_14
Rad17
AAA_18
ABC_tran
TsaE
NTPase_1
Resolvase
NB-ARC
Sigma54_activ_2
IstB_IS21
MMR_HSR1
AAA_24
NACHT
Bac_DnaA
AAA_19
DUF87
RsgA_GTPase
AAA_PrkA
Motif
Other DBs
NCBI-ProteinID:
UAW97521
LinkDB
All DBs
Position
complement(2657220..2658263)
Genome browser
AA seq
347 aa
AA seq
DB search
MLEEDRLIAASPRQQEEVIDRAIRPYRLADYIGQPTVREQMELFIKAAKGRGEALDHVLI
FGPPGLGKTTLANIIAQEMGVKIKSTSGPVLERAGDLAAMLTNLEAGDVLFVDEIHRLSP
VVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGMLTNPLRDRFGIVQR
LEFYGVDDLSTIVSRSAAILGLQLDPAGAREVARRSRGTPRIANRLLRRVRDFAEVRSEG
AITREVADQALNLLDVDEQGFDHMDRRLLLTMIDKFDGGPVGVDSLAAAISEERHTIEDV
LEPYLIQQGFIMRTPRGRVVTRHAYLYFGLDLPARMERNTPDLFSDS
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgttggaagaagaccgcctgatcgccgcctcgccgcggcagcaggaagaagtgatcgat
cgggcgatccgcccgtaccggcttgccgactatatcggccagcccaccgtgcgcgagcag
atggagctgttcatcaaggcggccaaggggcgcggcgaggcgctcgaccatgtgctgatt
ttcggtccgccaggcctgggcaagaccacgctggcaaacatcattgcccaggaaatgggc
gtgaagatcaaaagcacctccggtccggtgctcgagcgggccggtgatctggccgccatg
ctgaccaatctggaagcaggggacgtgctgttcgtcgacgagatccaccgtctgtctccg
gtcgtggaggagattctctatcccgcgatggaggactatcagctcgacatcatgatcggc
gagggtcctgctgcacgatccatcaaactcgacctgccaccgttcaccctggtaggcgcg
accacccgcgccggcatgcttaccaatccgctacgtgaccgtttcggtatcgtccagcgc
ctggagttctacggcgtcgacgacctgtccaccatcgtatcccgctcggccgccatcctc
gggttgcagctcgatcccgcaggcgccagggaggtggcccgacgttcgcgcggcacgccg
cgtatcgccaatcgcctgttgcgccgagtaagggattttgccgaggtacgcagcgaaggc
gccattactcgcgaagtcgcggatcaggcactcaatctgctcgacgtggacgagcagggg
ttcgatcacatggaccgccgcctgctgctaacgatgatcgataaattcgatggtgggccg
gtaggtgtagacagcctcgccgccgctatcagcgaggagcgccacaccatcgaggatgtg
cttgaaccctacctgattcagcaggggttcatcatgcgcaccccgcgtgggcgtgtggtg
acccgtcatgcctatctgtatttcggcctcgatctgcctgcacggatggaacgcaataca
ccggatctgttcagcgacagctga
DBGET
integrated database retrieval system
