Halopseudomonas nanhaiensis: KEM63_13100
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Entry
KEM63_13100 CDS
T07673
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pnn
Halopseudomonas nanhaiensis
Pathway
pnn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pnn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KEM63_13100 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnn03400
]
KEM63_13100 (ung)
Enzymes [BR:
pnn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
KEM63_13100 (ung)
DNA repair and recombination proteins [BR:
pnn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KEM63_13100 (ung)
Prokaryotic type
KEM63_13100 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
ECM1
Motif
Other DBs
NCBI-ProteinID:
UAW97727
LinkDB
All DBs
Position
complement(2890878..2891567)
Genome browser
AA seq
229 aa
AA seq
DB search
MAARDVRLEPGWKQALAEEFDQPYMQQLRAFLLEQKTAGKQVYPPGPLIFNALNSTPLDD
VKVVIIGQDPYHGPGQAHGLCFSVPPGVPAPPSLQNIFKELQRDLALPIPRHGCLQSWAE
QGVLLLNAVLTVEHSQAGSHANRGWERFTSRIIDVLNARCEHLVFMLWGSYAQKKGQQIN
ADRHLVLKSVHPSPLSAHRGFIGNGHFSQANEYLRRHGRPAVDWELPAL
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcgcgacgtacggcttgaaccgggctggaaacaggcgctcgccgaagagttc
gaccagccttacatgcaacagctgcgagcgtttctgctggagcagaagacggcgggcaag
caggtttatccccccggccccttgatcttcaatgcattgaacagcactccgctggacgac
gtgaaagtggtcatcatcggccaggacccgtatcacggtccggggcaggcccatgggctg
tgtttttcagttccccccggcgttcctgcgccaccttcgctgcagaacatcttcaaggag
ctgcagcgcgatctcgcccttcccattccgcgccacggttgcctgcagagctgggccgag
cagggcgttctgctgctcaatgcggtgttgaccgtggaacacagccaggccggttcccat
gccaatcgcggctgggagcgcttcacgtcgcgcatcatcgatgtgctcaacgcccggtgt
gagcacctggtgttcatgctctggggcagctacgcacagaagaaggggcagcagatcaat
gcagacaggcatctggtgctcaagtcggttcatccgtcgccgttgtcggcgcaccgcggt
ttcattggcaatggtcacttctcgcaagccaacgagtatctgcgccgccatggcagaccg
gcggtagactgggagcttccggcgctctga
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