Halopseudomonas nanhaiensis: KEM63_13670 Help Entry KEM63_13670       CDS       T07673                                  Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism pnn  Halopseudomonas nanhaiensis Pathway pnn02020   Two-component system pnn02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:pnn00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     KEM63_13670  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     KEM63_13670  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:pnn03021]     KEM63_13670 Transcription machinery [BR:pnn03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      KEM63_13670 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR Motif Other DBs NCBI-ProteinID:  UAW97832 LinkDB All DBs Position 3009607..3011106 Genome browser AA seq 499 aa AA seqDB search MKPSLVLKMGQQLTMTPQLQQAIRLLQLSSLDLQQEVQEALEANPMLEMADDGDDDYGPS APDTSPDSDDAPAVTIPEPVELDSIEQHGQGEEGNWNEQIPSELPVDTQWEDVYQTSASS LPSNDDEDWDFTARTGTGETLQSHLEWQLNLIPLSETDYQIALALIDGINPDGYLHESLQ DILDSLDPELEVELDEVEMVLHRIQQFEPVGVGARDLRECLLLQLRQMPAGTPMLEQATR VVKDHLELLGNRDFAQLMRRSKLKEDQLRDAVALIQTLNPRPGSEIASGDAEYVIPDVIV RRDTNRWIVELNQESVPKVRVNTHYASMVRRADSSEDNTYLRNHLQEARWFIKSLQSRNE TLMKVATQIVEHQRGFLEHGEEAMKPLVLHDIAEAVGMHESTISRVTTQKYMHTPRGIFE LKYFFSSHVGTTEGGEFSSTAIRALIKKLVAAENPKKPLSDSKIAGLLEEQGISVARRTI AKYRESLNIAPSSERKRLV NT seq 1500 nt NT seq  +upstreamnt  +downstreamnt atgaaaccatcgctcgtcctcaagatggggcagcagctgacgatgacgccgcagctgcag caagccatccgactgctacagctctccagcctcgacctccagcaggaagttcaggaggca ctggaagccaatcccatgctggaaatggcagacgacggcgacgacgactacggtcccagc gcaccggacacttcgcctgacagcgacgacgcccccgcggtgaccatccccgaacccgtc gagctcgactccatcgagcagcacggtcagggtgaagaaggcaactggaacgagcagatt cccagcgagttgccagtcgacacccagtgggaggacgtctaccagacctccgccagttcc ttgcccagcaacgacgacgaggattgggatttcactgctcgcaccggtaccggcgagacg ctgcagagtcacctggaatggcagctgaatctcatcccgctctccgaaaccgactaccag atcgccctggcgctcattgacggcatcaaccccgacggctatctgcacgagtcgctgcag gacattctcgactcgctcgatcctgagctcgaggtcgagctcgacgaggtcgagatggtg ctgcatcgcatccagcagttcgaaccggtcggcgtgggcgcgcgtgatctgcgtgaatgc ctgctgttgcagctccgacaaatgcccgccggcacgcccatgctggagcaggccacccgc gtggtgaaagatcacctggagctgctcggcaatcgcgatttcgcgcagctgatgcgccgc agcaagctcaaggaagatcaactgcgcgacgcggtagcgttgatccagacgctgaacccc cgtcccggatcggaaatcgcctcaggcgatgccgagtacgtgattcccgatgtcatcgtc cggcgtgataccaatcgctggatcgtcgagctgaaccaggagtcggtgcccaaggtgcgg gtgaacacccactacgcctcgatggtgcgccgtgccgacagtagcgaagacaacacctac ctgcgcaaccatctgcaggaagcgcgctggttcatcaagagcctgcagagccggaacgaa acgctgatgaaggtggcgacgcagatcgtcgaacatcagcgcggctttctcgagcatggc gaggaagcaatgaagccgctggtgctgcatgacatcgccgaagcggtgggcatgcatgag tcgaccatttcgcgggtgacgacgcagaaatacatgcacaccccgcgcggcatattcgaa ctcaagtactttttctcgagccacgttggcaccaccgaaggcggggaattctcctccacc gccatccgtgcgctgatcaagaaactggtcgccgcagaaaacccgaagaaaccattgagc gacagcaagatcgctggtttactggaagaacaagggatatcggtagcccgcagaacgatt gccaagtatcgcgagtcgctcaatatcgcgccctcgagcgagcgcaagcggttggtgtga

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