Halopseudomonas nanhaiensis: KEM63_14925
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Entry
KEM63_14925 CDS
T07673
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pnn
Halopseudomonas nanhaiensis
Pathway
pnn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pnn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KEM63_14925 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnn03400
]
KEM63_14925 (recC)
Enzymes [BR:
pnn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KEM63_14925 (recC)
DNA repair and recombination proteins [BR:
pnn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KEM63_14925 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
UAW98058
LinkDB
All DBs
Position
complement(3268176..3271661)
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AA seq
1161 aa
AA seq
DB search
MQQGDSLVPGFMIVHGNRLESLRHLVVNWLARNPLSPLENEVMLVQSNGIAQWLKQALAA
DVSTDESGGCGIAAAIDVQLPARFMWQAYRGVLGKESVPETSPLDKQPLTWRLMRLLPAL
IDAPAFEPLRRFLKDDDDCRKRYQLAVRLADLFDQYQVYRADWLADWSAGRDQLRQARDG
IRPLEAADLWQPALWRALLADVGEAHLSDSRAGIHPRFVAALGQASQRPDALPRRVVVFG
ISSLPAQYVEALAAMGRHCQILLCVLNPCQHHWGDIIADQDLLRHQYRRQARRPGAPLHL
DEHTLHQHAHPLLAAWGKQGRDYINLLDSHDEQSEYRAAFEPINGGRIDLFDEPDTAALL
GQLQDDIRDLRPLQETRARWPAVNVEADASIRFHIAHSAQREVEILHDQLLHALDSDRTL
RPRDIIVMMPDVDSYAPHVQAVFGQHPPGDPRHIPFSLADQGQRGQEPLLIALEHLLRLP
ESRLPVSEILDLLDVPAVRERFGLREADLPTLQRWIEGAGIRWGLDETRRTALGMPPGLE
ATSWRFGLRRMLLGYAAGQSLPWADIEPYDEIGGLDAALIGPLSDLLHRLDQHERALAEP
AAPSVWGERLRALLADFFTVHSERDQLLHAQLLEGLAGWLELCETVDLHEPLPLNVVAEA
WLDGVGQSQLSQRFLGGAVSVCTLMPMRAIPFRRVCLLGMNDGDYPRAQPPLDFDLMGRD
YRPGDRSRREDDRYLLLEALLSARDSLYVSWVGRSIRDNSARPPSVLIGQLRDHLHNGWQ
SAGEAGLLESLTTEHPLQPFSRSYFDEQSPLFSYASDWVRLHTNSAQTPVNTALPPLHPD
GPIELIALQRFLRHPVEHFFAARLKVWLSEDEVVASDDEPFALGGLQRHQLSQELLETLQ
DAPVDADLQTLIEKEAVRLQQRGRLPLAGFGDLTRGALIEPLHDQLVRYREQAQRWDRLL
EHPLPLFASAPGIELRSWLAGARESSSVSGQMRLRLVTGNLLAGRGKTMRWRKMLNELSL
HVLAAASGHALATTLFAADATIRLQPLDTQQAQGMVGDWLLGWLEGLRRPLPVEVETAFV
LLCEDDPAKALSKARSQYDGSDFSLGEVRKSVALQRSYPDFASLLASEEFEGWVEALYRP
LARAAHDGWLECVPVEERGHD
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaaggcgattcactggtacccggattcatgatcgtccacggcaaccgtctcgag
tcgctgcggcatctggtggtcaactggcttgcccgaaatccgctttcaccgctcgaaaat
gaagtgatgctggtgcagagcaacggcatcgcccaatggctcaagcaggcgctggcagca
gatgtctccacggacgaatcgggtggatgcggcatcgctgcggccatcgatgtccagttg
ccggcccgcttcatgtggcaggcctatcgtggggtgctgggcaaggagtcggtaccggaa
acgtcgccgctggacaagcagccgctgacctggcggctgatgcggctgctcccggcgctg
atcgacgcccctgcattcgaaccgctgcgccgtttcctgaaggatgacgacgattgtcgc
aagcgctatcagctggctgtccgactggccgatctgttcgaccagtatcaggtataccgc
gccgactggctggctgactggtcggcaggtcgcgaccagctgcgccaggcccgggacggc
atccgtcccctcgaagccgcggacctatggcagccggccctgtggcgggcgctgctggca
gatgtcggcgaggcccatctgagcgacagccgcgccggtatccatccgcgcttcgtggcc
gcgctggggcaggcttcccagcgccccgacgccttgccgaggcgggtggtggtattcggc
atttcctcgctcccggcccagtatgtcgaagcgctcgccgcgatgggccggcattgccag
atactgctctgcgtactcaatccctgtcagcaccactggggcgacatcatcgccgatcag
gatctgctccggcatcagtaccggcggcaagcccggcgtcccggtgccccgcttcacctg
gacgaacacacgctgcaccagcatgcccatcctctactcgcagcgtggggcaagcagggc
cgtgactatatcaatctgctcgacagtcacgatgagcagtccgaataccgcgcggcgttt
gaacccatcaacggcgggcgaatcgacctgttcgacgagccagacaccgcagcgctgctg
ggccagctccaggacgacatacgcgatctgcgcccgctgcaggagacccgcgcccgatgg
cccgcggtgaatgtggaggctgatgcgtcaatccggttccatattgcccatagcgcgcag
cgcgaagtcgaaatactgcacgaccagctgctccacgctctggacagcgatcggacgctc
cggccgcgcgacatcattgtcatgatgcccgacgtcgacagctatgccccgcacgtccag
gcggtgttcggacagcatccgccaggggacccgaggcatattccgttttcgctcgccgat
cagggccagcgcggacaggagccgctgctgatcgcccttgagcatctgctgaggcttccc
gaaagccggctgccagtcagcgagatcctcgacctgctggatgtgccggcggtgcgcgag
cggttcggcctgcgcgaagcggacctgcccaccctgcagcgctggatcgaaggtgccgga
atccgctggggcctcgatgaaacgcgccgtacggcattgggcatgccgccgggactcgag
gcgacgagctggcgctttggtctgcgccgcatgctcctgggttacgcggcagggcagagt
ctgccctgggcggacatagagccgtacgatgaaattggtggattggatgccgcgttgatc
ggtccgttgagcgatctgctgcaccgcctggatcaacacgaaagagcgctggccgaaccg
gccgcgccgagtgtctggggggagcggctgcgcgcgttgctggctgatttctttacggtg
catagcgagcgagaccagttgctgcacgcccagttgctggaagggctggccggctggctg
gagctgtgcgagacggtggacctgcacgagccgttaccgctgaacgtggtcgccgaggcc
tggctcgacggcgtcggtcaatcgcagctgagccagcgctttctgggtggtgcagtaagc
gtgtgtacgctgatgccgatgcgtgccatcccgtttcgccgagtctgtctgctgggcatg
aacgacggggattatccgcgcgcccagccgccactggatttcgatctgatggggcgtgac
taccgccccggcgatcgctcgcggcgcgaggacgaccggtatctgctgcttgaagcgctg
ctctcagcacgtgacagcctttacgtaagctgggtcggtcgcagtatccgcgacaacagc
gcacggccgccctcggtactgatcgggcaattacgcgaccacctgcacaacggttggcag
tctgcgggcgaggcgggtctgctggaaagcctgaccaccgaacatccgttgcagcctttc
agtcgctcgtatttcgatgagcaatcaccgctgttcagctacgccagtgactgggtcagg
ctacacacgaacagtgcccagacgccggtcaacacggctctgccaccactgcacccggac
ggccccattgagctgatcgctttgcagcggttcttgcgtcatcccgtcgagcactttttt
gccgcgcggctgaaggtgtggctgagcgaggatgaggtggtcgcgagcgacgacgagccg
tttgcgctggggggcctgcagcgccatcagctcagccaggagttgctggagacgctgcag
gatgcgcctgtcgatgcagatttgcagactctgatcgagaaggaagctgtgcggcttcag
cagcgcggcagactgccgctggccggattcggcgacctgacgcgcggagcgctgatcgag
ccgctgcatgatcagctggtgcgctatcgggagcaggcgcaacgctgggatcgccttctg
gagcaccctttgccgctctttgccagcgccccggggatcgagctgcgcagctggctggcc
ggcgcccgcgagtcgagctccgtgtcgggccagatgcggctgcggctggtcactggcaat
ctgctggcagggcgcggcaagacaatgcgctggcgcaagatgctcaacgagttgtccctg
cacgtgctggctgcggccagtggccacgcgctcgcaacgacactcttcgccgccgatgcg
actatccgcctgcagccgctcgacacacagcaggctcaaggcatggtcggggactggctg
ctcggatggctggaaggattgagacggcccctgcccgtggaggtggaaacggcctttgtt
ctgctctgcgaggatgacccggcgaaggccttgagcaaggcccgaagccagtatgatgga
tccgatttcagtctgggagaggtgcgcaagagcgtggcgctgcagcgaagctatccggat
ttcgccagcctcctggcgtccgaagagttcgaaggatgggtcgaggctctctatcgtccg
ctggcacgagcggcccacgatggctggctggaatgcgtgccagtcgaggagaggggccat
gactga
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