Halopseudomonas nanhaiensis: KEM63_15580
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Entry
KEM63_15580 CDS
T07673
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K02584
Nif-specific regulatory protein
Organism
pnn
Halopseudomonas nanhaiensis
Pathway
pnn02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pnn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KEM63_15580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pnn03000
]
KEM63_15580
Transcription factors [BR:
pnn03000
]
Prokaryotic type
Helix-turn-helix
Other families
KEM63_15580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
HTH_8
AAA_5
MCM
AAA_2
AAA_3
Mg_chelatase
AAA
HTH_30
AAA_19
AAA_22
Phage_NinH
AAA_16
HTH_28
RWP-RK
Lysine_decarbox
Motif
Other DBs
NCBI-ProteinID:
UAW98169
LinkDB
All DBs
Position
3387431..3389071
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AA seq
546 aa
AA seq
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MTISLPERMSQQMKRELVVILEMAKLMEKPLDAPRTIQGLLRLLSQLYGLNCGRVSLPDA
ATSTLQVRYSYGLSPEDLKAGRFNLNFNEGVTGYVMRTGSIGLVPDVEKEPLFIHRITEL
SHHSGGRMAFIAVPILETGTPIGVLSVQREGLHERPFDSDISLLRVAAAMIGQLLRIHKF
VVEQTAHLVKENQNLRHSIAVEGMLKQSLAHGILGTSQALMDAVRSAIQVARSDAPVMLL
GESGTGKEKFARMTHQQSDRREKPFICINCAAIPAELLESELFGHVKGAFTGASQSKQGK
ILQADGGTLFLDEIGDMPLALQSKLLRVLQEKKVDPIGSMQSVSVDFRVITATHVNLQES
VNQGSFRLDLFYRLHVVPVHLPPLRERQGDIKQLALHFLNELNHHYERNWSLAGDAFAVL
ENFDWPGNIRQLQNVMERTALTNDEDLISADKLRQSLASESAIHIPQRHAPAAAAPPAMV
DVTVNGQDNRTYGRSYNWVHQDEAETIRAMLALTNNNQSEAARRLKISLRQLRYRVDKLG
IERPGP
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgacgatttccctcccggaacggatgtcccagcagatgaagcgcgaactggtcgtgatt
ctggaaatggccaagctgatggaaaagcccctcgatgcgcctcgcacgattcagggcctg
ctgcgcctgctgtcccagctgtacggcctgaactgcgggcgggtaagcctgcctgatgca
gcgaccagcacgcttcaggtgcgctactcctacggcctgtctccggaagacctcaaggcc
gggcgtttcaacctgaacttcaacgaaggggtgaccggctacgtcatgcgcactggctcg
ataggcctggtaccggatgtggaaaaggagccgctgttcattcatcggatcaccgagctg
tctcaccacagcggcgggcgcatggcattcatcgccgtacccatcctggagaccggcacg
ccgattggcgtgttgtcggtgcagcgcgaaggactgcacgagcgtccgttcgatagcgac
atcagcctgctgcgcgtcgctgccgcgatgatcggtcagctactgcgcattcacaagttc
gtggtcgagcagacagcgcatctggtcaaggaaaaccagaacctgcgccacagcattgct
gtggaaggcatgctcaagcagagccttgcccatgggattctgggtaccagccaggcgttg
atggacgcggtgcgctcggccatccaggtcgcgcgcagcgacgcaccagtgatgctgttg
ggcgagtcggggaccggcaaggaaaagtttgcacgcatgacccaccagcagagcgaccgc
cgggaaaagccgttcatctgcatcaactgcgccgccatcccggccgaattgctggagtcc
gagctgttcgggcatgtgaaaggcgcctttaccggggcctcgcagagcaaacagggcaag
atccttcaggccgacggtggcacgctgtttctcgacgagataggtgatatgcccctggcg
ctgcagtccaagctgctgcgcgtcttacaggaaaagaaggtcgacccgatcggcagcatg
caatcggtgtcggtcgacttccgggtcatcaccgccacgcacgtgaatctgcaggaatcg
gtcaaccagggcagctttcgtctggacctgttctaccggctgcatgtggtcccggttcac
ctgccaccgctgcgcgagcggcaaggcgacatcaaacagctcgcgctgcattttctcaac
gagctcaaccatcactatgagcggaactggagtctggccggggacgcgtttgccgtgctc
gagaacttcgactggccggggaacatccgccagttgcagaacgtgatggaacgcaccgcg
ctgaccaacgacgaggatctgatcagcgcagacaagttgcgccagagcctggcctccgaa
agtgcgattcacataccccagcgtcatgcgcccgccgccgcagcgccgcctgcaatggtc
gacgtcaccgtgaacggccaggacaaccgcacctacggccgctcgtacaactgggtacac
caggatgaagcggaaaccattcgcgccatgctggccctgaccaacaacaaccagtcggag
gccgcacgacggctgaagatcagcctccggcaacttcgctatcgggtcgacaagctgggc
atcgagcgcccgggaccctga
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