Halopseudomonas nanhaiensis: KEM63_16105
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Entry
KEM63_16105 CDS
T07673
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pnn
Halopseudomonas nanhaiensis
Brite
KEGG Orthology (KO) [BR:
pnn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pnn03021
]
KEM63_16105 (rpoH)
Transcription machinery [BR:
pnn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KEM63_16105 (rpoH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
UAW98268
LinkDB
All DBs
Position
complement(3499538..3500404)
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AA seq
288 aa
AA seq
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MSTALQPVHNLVPGANLEAYVQTVSSIPVLSIEEERELADRLFYQQDLEAARQLVMSHLR
FVVHIARSYSGYGLAQADLVQEGNVGLMKAVKRFNPEMGVRLVSFAVHWIRAEIHEFILR
NWRIVKVATTKAQRKLFFNLRSAKKKLTWLSHDEVNAVAEDLGVATREVREMESRLYGQD
LGFDGAQDDDDDGAAYAPVHYLEDKRYDPATQLESADWSDSSVNQLQQGLEQLDDRSRDI
LYQRWLAEEKATLHELAAKYQVSAERIRQLEKNAMNKLKKNLEVDVEA
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagcactgctttacagcccgtacacaacctggttcctggtgcgaacctggaagcgtat
gttcagaccgtaagcagcatcccggtactgagtatcgaggaagagcgcgagctggctgat
cgtttgttctaccagcaggaccttgaagcggcccggcaactcgtcatgtcgcacctgcgg
ttcgtggtgcacatcgctcgcagttattcgggctacggcctggcgcaggccgatctggtc
caggagggcaacgtcggcctgatgaaggcggtcaagcgattcaatccggaaatgggcgtg
cggctggtgtccttcgccgtgcactggattcgggcggagattcacgagttcatcctgcgt
aactggcgcatcgtcaaggtcgccacgaccaaggcccagcgcaagctgttcttcaacctg
cgcagcgcaaagaagaaactgacctggttgtcgcatgacgaagtcaacgcggtggccgag
gatcttggcgtcgcaacgcgcgaagtgcgcgaaatggaaagccgattgtacggccaggac
ctgggattcgatggtgcgcaggatgatgatgacgatggcgcagcatacgccccggtccat
tatctggaagacaagcgctacgatccggcaacgcagctggagtcggccgactggtcagac
agttcggtgaaccagctccagcagggtctggaacagcttgatgaccgcagccgcgatatt
ctctaccagcgctggctggcggaggaaaaagccacactccacgaactggcggccaagtat
caggtgtcggccgagcgtatccgccagcttgaaaagaacgccatgaacaagctgaagaag
aatctcgaagtcgacgtcgaggcctga
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