Halopseudomonas nanhaiensis: KEM63_16580
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Entry
KEM63_16580 CDS
T07673
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pnn
Halopseudomonas nanhaiensis
Pathway
pnn03420
Nucleotide excision repair
pnn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pnn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KEM63_16580 (uvrD)
03430 Mismatch repair
KEM63_16580 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnn03400
]
KEM63_16580 (uvrD)
Enzymes [BR:
pnn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KEM63_16580 (uvrD)
DNA repair and recombination proteins [BR:
pnn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KEM63_16580 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
KEM63_16580 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
Viral_helicase1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
UAW98361
LinkDB
All DBs
Position
complement(3594708..3596879)
Genome browser
AA seq
723 aa
AA seq
DB search
MDISHLLNSLNDAQRQAVTASVGQQLVLAGAGSGKTRVLVHRIAWLIQVENASPWSVLSV
TFTNKAAYEMRHRIEQLLGISPQGMWVGTFHGLAHRLLRAHWREAGLAEQFQILDSDDQL
RLVKRVIRELNLDENQWAPRQAQWWINGQKDEGLRPQHIQPAGDVFLATMQRIYQAYEQA
CDRAGVVDFAELLLRSLELWRDNVSLREQYQARFRHMLVDEFQDTNAVQYAWLRLIAGKN
PSLMVVGDDDQSIYGWRGARIENIQQFQTDYPNAELIRLEQNYRSTACILRAANSLIGNN
AGRMGKELWTDGCEGDPIALYAGYNEQDEARFIVERIEQGIASGLARSEIAILYRSNAQS
RVLEEALLRAAIPYRIYGGQRFFERAEIKNAMAYMRLVANRGDDGALERIINLPTRGIGD
KTVELLRQHAREQDVSLWQSACDLIDLKRLTGRAGNAVQSFLQLIEDIALRVEGLPLYSM
TQQVVEHSGLLRFHENEKGDKGQARVENLEELVSAARGFENEVIDEEQEGDTLLAFLAHA
SLEAGETQADRHEDSVQLMTLHSAKGLEFPLVFLAGVEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQQLVITWAETRRLYGSETFNKVSRFVREIPPELIKEVRLSSQVSRPFGPKN
NMFQQEASESTGFALGQRVMHSLFGEGVVLNYEGHGAQARIQVNFDDEGSKWLMVAYAKL
EPL
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggatatttcacatctgctcaactcgctcaatgacgcccagcggcaggccgtgaccgcc
tcggtcggccagcaactggtgctggctggtgccggctccggcaagacccgggtactcgtt
catcgcatcgcctggctgattcaggtcgagaatgcctcgccctggagcgtgctctcggtg
accttcaccaacaaggccgcctacgagatgcgtcatcgcatcgagcagctgctgggcatc
tccccgcagggcatgtgggtgggcaccttccatggcctggcccatcgtctgctgcgggca
cactggcgcgaggccgggctggccgagcagttccagatcctcgacagcgacgaccagctg
cgcctggtcaagcgggtgatccgcgagttgaacctcgacgagaaccagtgggcgccgcgc
caggcgcagtggtggatcaacgggcagaaggacgaaggcctgcgcccgcaacacattcag
ccggctggcgatgtgttcctcgccaccatgcagcgcatttaccaggcctacgagcaggcc
tgtgatcgtgccggcgtggttgacttcgccgagctgctgctgcgttcgctcgagctctgg
cgcgacaacgtcagtctgcgcgagcagtatcaggcgcgcttccggcacatgctggtcgac
gagtttcaggacaccaacgcggtgcagtacgcctggctacggctgatcgccgggaaaaac
ccgagcctgatggtggtgggtgatgacgaccagtcgatctatggctggcgcggcgcacgc
atcgagaacattcagcagttccagaccgactaccccaacgccgaactgatccgcctggag
caaaactaccgctcgacggcctgcattctgcgcgcggccaactcgctgatcggcaacaat
gccgggcgtatgggcaaggagctgtggaccgacggctgcgaaggtgacccgattgcgctc
tatgccggctataacgagcaggacgaggcgcgtttcatcgtcgagcgcatcgagcagggc
atcgccagcggtctggcacgtagcgagatcgccattctctaccgctccaacgcccagtcc
cgggtattggaagaagcgttgctgcgcgcagcgatcccgtaccgcatctacggcggccaa
cgcttcttcgaacgcgccgagatcaagaacgccatggcctatatgcggctggtggccaac
cgcggcgatgacggcgcgctggagcgcatcatcaacttgccgacccgcggcattggtgac
aaaaccgtcgagctgctgcgtcagcacgcccgcgaacaggacgtctcgctgtggcagtca
gcctgcgatctgatcgacctcaagcgcctgaccggccgcgccggaaacgccgtgcaatcc
ttcctgcagctgatcgaggacattgccctgcgcgttgaaggcctgccgctgtacagcatg
acccagcaggtcgtcgagcacagcgggctgctgcgctttcacgagaacgagaagggcgac
aagggtcaggcccgggtcgagaacctggaagaactggtgtccgccgcgcgcggtttcgag
aacgaagtcatcgacgaggagcaggagggcgacacgttgctggcgttcctcgcgcacgcc
tcgctcgaagcaggggaaactcaggccgaccgccatgaagacagcgtgcagctgatgaca
ttgcacagcgccaagggtctggaattcccgctggtgttcctcgccggggtggaagagggt
ctgttcccgcacaagatgagcctggaagagccgggccgtctggaagaagagcgtcgcctg
gcctacgtgggcatcacccgcgccatgcaacagctggtgataacctgggccgaaacccgc
cgcctgtacggcagcgaaacgttcaacaaggtttcgcgcttcgtccgcgaaatcccgccg
gagctgatcaaggaagtgcgcctgagcagccaggtgagccgcccgttcgggccgaagaac
aacatgttccagcaggaagccagcgaaagcaccggtttcgcgttgggccagcgcgtcatg
cattcgctgttcggcgaaggcgtggtactcaactacgaaggccacggcgcccaggcgcgg
attcaggtgaacttcgatgacgaaggcagcaagtggctgatggtggcctatgccaagctg
gagccgctctga
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integrated database retrieval system
