Parastagonospora nodorum: SNOG_00414
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Entry
SNOG_00414 CDS
T01161
Name
(RefSeq) hypothetical protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
pno
Parastagonospora nodorum
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
SNOG_00414
Enzymes [BR:
pno01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
SNOG_00414
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
5968215
NCBI-ProteinID:
XP_001791100
UniProt:
Q0V6F0
LinkDB
All DBs
Position
Unknown
AA seq
536 aa
AA seq
DB search
MLIKSPLLAVAAFSSSALAAFGASQSGDTITIDAGSANPLIFQVNSKSCDVRSIKYRSEE
LQYPSTFTHIGSGLGSATVKYEIISNQYVKVTCTTSTLTHYMVVRSGDPTIWMATYTTAE
PSIGELRFLARLNNKILPDQYPYDLVSTTGGSSSTIEGSDVFVVNGQTRSKFYSSERFID
DTRVWSFSFNLTWANKIHACMLMNSYSYEGSSGGPFFRDINTNNNGDYTSLTFYMNSGHV
QTEKFRMGLHGPYGLAFTRSGIPEGGNKLDTTFFKDLGITGYVAPSARGTVTGTATGIGS
NFQKVLHWYNDAAQYWAYADSAGNFASPAMKPGTYTQVLYRGEFKVKASSVTVSAGKATT
ANIAADTETKTSIWRIGEWDGQPTGFRNADKQLRMHPTDSRMASWGPLTYTVGSSTLNDV
PMAIVKDNNPLTIKFTGTHTAAATLRVGTTLAFAGCRPAVVVNGYSPANPAAPSKIDSRG
LTRGAYRGFGEVYNYDIPAGKLVSGSNSITISCLSGSSGGGFLAPNVILDAIELFK
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgttgatcaaaagccctctcctggctgtggccgcgttctcgtcttcggcgctcgctgct
ttcggcgcctctcagagtggagacacgatcactatcgatgccggctcagccaacccgctc
atcttccaggttaattccaagagctgcgacgtcaggtccatcaagtaccgcagcgaagag
ctacaatacccatcgacctttacgcatatcggttctggcctaggctctgcgactgtgaag
tatgagatcattagcaaccagtatgttaaggtaacttgtaccacgtccaccttgacgcat
tatatggttgtgaggagcggcgacccgaccatctggatggctacgtacactactgctgaa
ccttctatcggcgaattgcgattccttgctcgtctgaacaacaagatacttccggaccag
tacccatacgacttggtatcgacgactggtggatcaagttcgaccattgagggttcggat
gttttcgtggtcaacggtcagacacgatcgaagttctacagcagcgagcgcttcatcgat
gacaccagggtatggtccttctctttcaatctgacctgggctaataaaattcatgcatgc
atgctcatgaactcgtactcctacgaaggctcgtcaggtggtcccttcttccgtgacatc
aacaccaacaacaatggagactacacatcacttaccttctacatgaactccgggcatgtt
cagactgagaagtttcgcatgggccttcacggcccctatggcctggcattcacacgctcc
ggtatcccagaaggtggcaacaaattggacacgacctttttcaaagacctcggcataacc
ggctatgtcgctccctcagctcgcggtacagtcaccggaacagcgaccggcattgggtcc
aatttccaaaaggttctccactggtacaatgacgcagcccaatactgggcgtatgctgac
agcgctggaaacttcgcttcgcctgctatgaagcctggaacgtacacacaggtcctctac
cgaggcgaattcaaagtcaaagcctccagcgtcactgtcagtgcaggaaaggcaacaacc
gccaacatcgccgccgacaccgagaccaagacatcaatctggagaattggcgaatgggat
ggccagccgacaggcttcaggaacgcagataagcaacttcgcatgcatcccactgattcg
cgcatggcatcctggggtccccttacgtacaccgtcggttccagcacactcaacgacgtg
cccatggcgatcgtcaaggacaacaacccactcacaatcaagtttactggcacgcatact
gcggctgctaccttgcgtgttggtaccacgctagcgtttgcgggatgtcggccggcagtg
gtggtaaatggatacagccctgctaatccggctgcgccaagcaagattgattctcgaggg
ttgacccgtggcgcctacaggggctttggcgaagtttacaattatgacatcccagcgggt
aagcttgtcagcggaagtaattccatcaccattagctgtcttagtggttcgtctggtggg
ggcttcttggctcccaatgtcatcttggatgcaatagagctgttcaagtag
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