Parastagonospora nodorum: SNOG_00429
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Entry
SNOG_00429 CDS
T01161
Name
(RefSeq) hypothetical protein
KO
K12876
RNA-binding protein 8A
Organism
pno
Parastagonospora nodorum
Pathway
pno03013
Nucleocytoplasmic transport
pno03015
mRNA surveillance pathway
pno03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SNOG_00429
09122 Translation
03013 Nucleocytoplasmic transport
SNOG_00429
03015 mRNA surveillance pathway
SNOG_00429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pno03019
]
SNOG_00429
03041 Spliceosome [BR:
pno03041
]
SNOG_00429
Messenger RNA biogenesis [BR:
pno03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
SNOG_00429
Spliceosome [BR:
pno03041
]
Complex C
Other components
EJC/TREX
SNOG_00429
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
Motif
Other DBs
NCBI-GeneID:
5968005
NCBI-ProteinID:
XP_001791115
UniProt:
A0A7U2HWS1
Q0V6D5
LinkDB
All DBs
Position
Unknown
AA seq
160 aa
AA seq
DB search
MADTEMEIDQPEQQEPEPSSADPKASDARTAAGATAVRSIEGWIIIVTNVHEEATEEDLQ
DMFGEFGTIKNLHMNLDRRTGYVKGYVLIEYPTLDEAKAAIKGANDEELLEQKITVDFAF
VRPPPASKGRAREHDRRQSGRGAARARSRSPGRDGEDMED
NT seq
483 nt
NT seq
+upstream
nt +downstream
nt
atggccgacacggaaatggaaattgaccagcccgagcagcaggagcccgaaccctcctct
gcggaccccaaggccagcgacgcgcgcacagcagccggcgcaacagctgtacgctcaatc
gaaggctggatcatcattgtcacgaatgtacacgaggaagcgacggaggaggatctgcag
gacatgtttggcgagtttggcaccatcaagaacttgcacatgaatttggaccgcaggaca
ggttacgtcaagggttacgttctcatcgaataccccacactcgacgaggccaaggccgcg
atcaagggcgcaaacgacgaggagttgctcgagcagaagatcaccgtcgactttgccttc
gtacgaccaccaccggccagcaaagggcgcgcacgcgagcacgacaggcgacaaagcgga
cgcggagctgctagagcaagaagcaggagtccagggcgcgacggcgaggacatggaagac
tga
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