Parastagonospora nodorum: SNOG_00716
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Entry
SNOG_00716 CDS
T01161
Name
(RefSeq) hypothetical protein
KO
K12816
pre-mRNA-processing factor 17
Organism
pno
Parastagonospora nodorum
Pathway
pno03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SNOG_00716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pno03041
]
SNOG_00716
Spliceosome [BR:
pno03041
]
Complex C
Other components
Step II factors
SNOG_00716
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
EIF3I
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_NWD2_C
Beta-prop_Vps41
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_NUP159_NUP214
eIF2A
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
5968372
NCBI-ProteinID:
XP_001791393
UniProt:
Q0V5J8
A0A7U2HWG6
LinkDB
All DBs
Position
Unknown
AA seq
450 aa
AA seq
DB search
MAGRVPTGFAAETYISEHTFRQGHRAIEGGNTKKRKREGKGDTSIVAGAGAYKGPWARYE
EERPDAASDDEYGSDEEVEIVYEEDEIEDNPTAAPGKLSGTDYQDTEAAGETSEFVGSQQ
YDYQGRTYMHVPTDLDIKLTGDYEPKNFIPKKLVHTYKYHTKSITQVRFIPDSGHLLLSA
SADSKIALWDVYHQRELLRTFSGHTKSVNDIDFNPTGTQFISASYDRYMKLWDTETGKCL
NKFTSGKTPHVVRINPSTPHEFLAGMSDKKILQYDTRSGEMVQEYDHHLGPVNTITFCDE
NRRFITTSDDKSLRAWEYGIPVPIKFIAEPYMFPMVRSAPHPSGKYVAFQSSDNQVTVYS
STDRFRQNRKKSYRGHNVAGYAPDIAISPDGQFISSGDSGGYCVFWDWKTCKMWHKIHAG
DAPVLAVQWHPRETSKVITGDLNGALKFWD
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggcaggccgagttcctactgggtttgcggcggagacatacatcagcgaacacaccttc
cgacaagggcatcgagcaatcgagggaggcaacacgaagaagaggaagcgtgaaggaaag
ggagataccagtatagttgctggcgcaggagcatacaaaggaccttgggcaagatacgag
gaggaacggccggatgctgcttcagatgacgaatatggtagcgatgaagaggtggaaata
gtatacgaagaagacgagattgaggacaacccaacagctgcgccgggaaagctttccggc
acggactatcaagacaccgaagctgctggagagacgagcgagttcgtgggtagccagcag
tacgattaccagggccggacgtacatgcatgtgccgactgacctagatatcaagctcacc
ggtgactacgaacccaagaacttcataccgaagaagcttgtccacacatacaagtaccac
accaaatccatcacgcaggtccgctttatcccagatagtggtcaccttctcctctctgcc
tcggccgactcgaagattgctctgtgggatgtataccaccaacgcgagctgttacgaacg
ttttcggggcataccaagtctgtcaacgacatcgacttcaatcctactggtacacaattc
atatctgcgagttatgatcggtacatgaagctttgggatacggaaacgggcaaatgcctg
aataagttcaccagtgggaagacaccgcacgtggtgcgcatcaacccgtctacaccccac
gagttccttgctggcatgagcgataagaagatcctacagtatgacacgagaagcggggag
atggtccaggaatacgatcaccatctgggccctgtcaacaccattaccttctgcgacgag
aatcgccgcttcatcacaacgtccgacgacaagtcgctgcgtgcgtgggaatacggcatc
ccagtccccatcaagttcatcgccgaaccatacatgtttcccatggtccgctctgcgcct
cacccttcgggcaaatacgtcgcattccagtcctccgacaaccaagtcaccgtctattcc
tccaccgaccgattccgccagaaccgcaagaagagctacaggggccacaatgttgcgggc
tatgctcctgacatcgcgatatcacctgatgggcagttcatcagctccggtgacagcggc
ggttactgtgtgttctgggactggaagacgtgcaagatgtggcacaagattcatgcaggt
gatgcgccggttctggctgttcaatggcatccgagggagacgagcaaggtcatcactggt
gacttgaatggtgctcttaagttctgggattag
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