Parastagonospora nodorum: SNOG_00833
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Entry
SNOG_00833 CDS
T01161
Name
(RefSeq) hypothetical protein
KO
K08737
DNA mismatch repair protein MSH6
Organism
pno
Parastagonospora nodorum
Pathway
pno03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SNOG_00833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pno03400
]
SNOG_00833
DNA repair and recombination proteins [BR:
pno03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
SNOG_00833
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
AAA_23
AAA_29
AAA_27
AAA_21
Motif
Other DBs
NCBI-GeneID:
5968413
NCBI-ProteinID:
XP_001791504
UniProt:
Q0V581
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MVRGVEGNEMSTPRPSQKKSQPPSGSQSGKNQKSILGFFQKKSTNSPSPAPSTPTTVKKT
PVSTLSKTAFNRPPASITPIPSSDAPVPSSPIRQEQDTPQGRNKENVFKAETNHISSEVA
GVAFSSPSRKAMQARKSVNYAESDDDEDEDDVLGPIANNSRGRATKRMRVSVQEDSDDEF
GLDAATQQAMIDDDVDDFIVPDDSDDEVVSKKRKRPSSTKPTIKSAPPSSPPVIHFKEET
EEDVVMSGTSTAQKWTYNAENPMVYVPRPCQDSKKDVNKRKERPSASEPEKRYPWLANME
DADRHPSDHPDYDPRTLYIPPGAMNAFSPFEKQYWEIKSKFWDTIVFFKKGKFYELYEKD
ASIGHQLFDLKLTDRVNMRMVGVPEASLDMWATQFVAAGHKVARVDQMESALAKEMRERD
DKKSTTKKADKVIRRELAAVLTAGTLVDTGMLQSDMSTYCMAIKEIERDNLPAFGVAFVD
SATAQFQLCEIADDIDMTKFETLIAQMRPGELLIEKSCISAKALRILKNNTAPSTIWNYL
KPSKEFWPADITIREIDSNNYFESPTEDNVEAWPPVLREAREQDLVMSAFGALLQYLRTL
KIERDLVTCGNFQWYDPIRKSTTLVLDGQSLINLEIFANSFDGSAEGTLFAMLNRCITPF
GKRLLRQWVCHPLADAQKINARLDAVDALNADSTIMDNFSASLSKLPDLERLISRVHANR
CKAQDFLKVLEGFEQIEYTVSLLKQFSEGEGVIGQLITSMPDLASALEPWKSAFDRDLAK
KEGILVPEPGVEEDFDNSQQEIDECKANLDQLLKKARKELGNNGIVFKDIGKEVYQLEVP
KKVKVPNTWDQMSATAKVSRYYTPELRKLVRALQEAEETHGQIVREVASRFCVRFDENYK
TWLAAVKIIAQLDCLISLAKASSSLGEPSCRPVFSEGKRTVVEFEELRHPCMLNTVDDFI
PNDIRLGGDESNISLLTGANAAGKSTILRMTCIAVIMAQVGCYLPCTSAKLTPVDRIMSR
LGANDNIFAAQSTFFVELSETQKILSEATPRSLVILDELGRGTSSYDGVAVAQAVLHDIA
SRVGCVGFFATHYRSLAKEFEFHPEVQNKRMRIHVDESSKSITFLYKLEEGVAEGSFGMH
CAAMCGIPSKIIDNAEKAAREWEHTSRLGERMEVNRDEGGVYVPLGVQSDVAWALREGLE
GVGDRALDVLREAIAAL
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgtggtgttgaaggcaacgaaatgtccacgcctcgcccctcacaaaagaagtcg
cagccaccgtccggctcacagtcagggaagaaccagaagtcgattctgggcttcttccag
aagaagtcgaccaattcgcccagtcctgcgccatccacgccaaccacagtcaagaagaca
ccagtctctaccctatccaagactgccttcaacagacctcccgcgtccatcacgcccatc
cccagcagtgacgcgcctgtgccatccagtccgatacggcaggagcaagacacaccccag
ggaaggaacaaagagaatgtcttcaaagctgagactaaccacatctcgtcagaagttgca
ggcgttgcattcagtagtccctcgcgcaaggctatgcaggcccggaaaagtgtaaactat
gccgaatcagacgacgacgaagacgaggatgacgtgcttggcccaattgccaacaactcc
aggggcagagccaccaagcgtatgagggtcagcgtgcaagaagattcagacgatgaattt
ggcttggatgctgcaacgcaacaggccatgatcgacgatgatgtcgacgactttatcgta
ccggacgactccgacgacgaggtcgtctcgaagaagcgcaaacgaccatcatcgacaaag
ccaaccatcaagtccgcgcccccatcttccccgccagtcatacacttcaaggaggaaacg
gaagaagatgtggtaatgtcaggcacatcaaccgcccagaagtggacatacaacgccgag
aaccccatggtctatgtgccgcgcccatgccaagactcgaagaaggacgtgaacaagagg
aaagagaggccgtctgcttccgagcccgagaagagatacccgtggctagcaaacatggaa
gacgcagatcgccatccctctgaccatcccgactatgacccgcgcacgctctacatccct
ccaggcgcaatgaatgctttttcgccattcgagaagcaatactgggagatcaagagcaag
ttctgggataccattgtcttcttcaagaagggcaaattctatgagctctatgagaaagat
gcctccatcggccaccaactgttcgacctcaagctgacggatcgagtcaacatgagaatg
gttggagtgccagaagcttccttggacatgtgggcgactcaattcgtcgcggctggccat
aaggtcgcaagggttgaccaaatggagtcggccttggcgaaggagatgcgtgaacgtgac
gacaagaagtctaccacaaagaaggcagacaaagttatccgaagagaactggctgccgta
ctgactgcgggtacgcttgtcgacactggcatgcttcagagtgacatgtcaacctactgc
atggccatcaaggagattgagagagacaaccttcctgcattcggagtcgcattcgtcgac
tctgcaacggcacagttccagctctgcgaaattgcagacgatatcgacatgacgaagttt
gagacacttatcgcgcagatgaggccgggtgagctgctcattgagaagtcatgcatttcg
gcgaaagcactgcgcatcttgaagaacaatacagccccaagcactatctggaattacttg
aagccaagcaaggagttctggcccgcagacatcacgattcgcgaaatcgactcaaacaat
tacttcgaatcgccgacagaggataacgtcgaagcctggccacccgtgttacgagaagcg
agagagcaggatttggtcatgtcagcttttggcgcgctcctgcagtaccttcgcaccctg
aagatcgagcgcgatctcgttacgtgcggcaatttccaatggtatgacccgatccgcaaa
tctactactctagtcctagacggccagagcttgatcaaccttgaaatattcgccaatagc
tttgacgggtctgccgagggcacacttttcgcaatgctgaatcgatgcatcaccccattt
ggcaagcgactacttcgacagtgggtatgccacccactagcagacgcacagaagatcaat
gctcgccttgatgctgtggatgcactcaacgcagactccaccatcatggacaacttcagt
gcctcgctcagcaaactacctgatctagagcgactcatctcacgtgtccatgccaaccgc
tgcaaagctcaggacttcctgaaggtacttgaaggattcgagcagattgagtataccgtc
agtcttttgaagcagttcagcgaaggtgaaggtgtcattggacaactcatcacttccatg
ccagaccttgcttctgcactggagccttggaaatctgcctttgatcgcgacctagcgaag
aaggaaggcattcttgttcccgagcctggtgtcgaagaagacttcgataatagccaacag
gagattgacgagtgcaaagcaaacctggaccagcttctcaagaaggcacgcaaagagctc
gggaacaacgggatcgtcttcaaagacatcggcaaagaagtctaccaactggaggtccca
aagaaggttaaggtgcccaacacatgggatcagatgtcagctacagctaaagtttcacgg
tactatactcctgaactgcggaagcttgtccgagctcttcaggaggccgaagagactcat
ggtcaaatcgtacgcgaagtagcatcgcggttctgcgttcgctttgacgaaaactacaag
acctggcttgctgccgtcaagatcattgctcagctcgattgcttgatcagtcttgctaag
gcgtcatcctcactcggagaacctagctgtcgtccagtgttctcggaaggcaaacgcacc
gttgttgagttcgaagagctacgccacccgtgcatgctcaacactgtggacgacttcatc
cccaacgacatcaggcttggtggagatgaatcaaacatcagcttgctcaccggtgccaat
gcggctggaaaatccaccatccttcgcatgacatgtatcgcagtcattatggcgcaggtt
ggctgctacctgccctgcacatctgcaaagctcacaccggtggaccgcataatgtcgcgt
ctcggtgccaacgacaacatctttgcagcccagtctacattcttcgtcgaactctccgag
acccaaaagattctttcggaagctacacctcgttctctcgttattcttgatgaacttggc
cgtggtacatcctcctatgacggcgtcgcggtcgcgcaagctgtgctccacgacatagca
tctcgtgtgggctgtgtaggcttcttcgctacacattaccgttccctcgccaaggaattc
gagttccatcctgaggttcaaaacaagcgaatgcgtatccatgtggacgagtcctccaag
tccattaccttcttgtacaagcttgaagagggcgttgcagagggcagctttggtatgcac
tgcgctgcaatgtgcggaattccaagcaagattatcgacaacgctgagaaggctgctcgc
gagtgggagcacacatcccgactgggtgaacggatggaggtcaatcgtgatgaaggaggt
gtgtacgtacctcttggtgtgcagagcgacgttgcttgggctctcagagagggccttgaa
ggcgtaggcgacagggccttggatgtactgagagaggctattgcggctctctga
DBGET
integrated database retrieval system