Parastagonospora nodorum: SNOG_00955
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Entry
SNOG_00955 CDS
T01161
Name
(RefSeq) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pno
Parastagonospora nodorum
Pathway
pno03420
Nucleotide excision repair
pno03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SNOG_00955
03430 Mismatch repair
SNOG_00955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pno03400
]
SNOG_00955
Enzymes [BR:
pno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SNOG_00955
DNA repair and recombination proteins [BR:
pno03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SNOG_00955
MMR (mismatch excision repair)
Other MMR factors
SNOG_00955
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
ADDB_N
AAA_11
Viral_helicase1
DUF6511
BTB_BTBDG
Motif
Other DBs
NCBI-GeneID:
5967774
NCBI-ProteinID:
XP_001791620
UniProt:
Q0V4V9
LinkDB
All DBs
Position
Unknown
AA seq
974 aa
AA seq
DB search
MDALLEGLNDAQRSAVTSPANVVQVLAPPGSGKTKTLTARVAYHVIHERLQPWNIIVCTF
TIKAAREMKERIKGFVGDKLEAKLILGTFHSVARRFLSRYGQEIGIDKNFGIADTNDSKA
IIKRIVTRYQYTVEPGHARSRISNLKSKGVTADAFAATSKNVNDNEFAMVYSSYEEHLKA
ANLLDYDDLLVRCVELLKRSPSCVSTIQAVLIDEYQDTNNIQYELMKLLAQSTRRITIVG
DPDQSIYSFRAAEIKNLFRMRDEFPESVVINLENNYRSSGCILNSALAVIEQDESRPQKA
LIATHVVGEAPTLRHLVSAHIEAKWTVDEIIRTRTLAAGLLDYNDYAILLRSSQLSLQLE
RALAKAGVPYRMVAGIKFFDRAEIKIILDYLRVVSQPEHNDAVARVINLPSRKVGDSTVK
ALLEEAEVKKVTLWKLVLDIAQGRIRSNCKVSTQAQKGIEQFVNVILTSREKLLPTKGEH
CDLYGLIGHILQKISFEAYLKQTHKENWKDRWDNVEELVAQATQMATALASGEEITDDAL
PIVEGIEQRQDTAADVLSKFLANVTLSSLADQNGGEVEQVTISTIHAAKGLEWPVVFLPA
MYDGSIPHSRADDHDEERRLLYVGMTHLAKILRRPCPTAEDIETARVGLERLEDDLYPAT
RDEIDGDDPSWGTSWDDKFDKFGPSSEAAQTGFKRRKLDANTSHAHDSVAVTMNRTSGFS
MASTTMHGAKPGFTTARDLGDLQAMQREAERVRMLATANDAERGRKAYQEDKKAETKPAQ
AKKTKPRAAGQGAITNFFAKRSVSTPSEDTEQVPPLPTASLQRSQSSLSSNTPLYDISNV
QSSTVRQPKPYQSLALPNYKLQNRPMASKPKRTEPPPDMENTRYVLLSSSPVKPDWEDTT
VGSADKEQEQAPPSPVKQSSSFVSSSGFRAASAFHTTSMNQVQNQAAQRKTLGTRRTMQG
WSVKHSSMPKPRPS
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggatgcactgctagagggtttgaatgacgctcagcgaagtgcggtcaccagtcccgca
aatgtcgttcaggttctcgcaccgccaggatctggaaagacgaagaccctcactgcgcgt
gtcgcgtaccatgttattcacgagcgcttgcagccatggaacatcatcgtgtgtactttc
accatcaaggcggccagagagatgaaggaacgcatcaaaggatttgtaggcgacaagctc
gaagccaagttgatcctgggaaccttccattccgttgcacgccgcttcctctctcgatac
ggacaagaaatcgggattgacaaaaactttggtatcgccgacacaaacgacagcaaagcc
ataattaagcgcattgtcacgcgttatcagtatacagtcgaacctggccatgctcgttcc
aggatatccaatctcaaatcgaagggggtcaccgcagatgcgtttgcagccactagcaag
aatgtcaatgacaacgagttcgccatggtatactcttcgtatgaggagcatctcaaagca
gccaatctgcttgattatgacgacctcctcgtacgatgtgttgagctgctgaagcggagt
ccatcctgcgtctcgacgatccaagcggtactcatcgacgagtatcaagacaccaacaat
attcaatacgaactgatgaagctcctcgctcaaagtacgagaagaattacgattgtggga
gatccggaccagagcatctacagtttccgcgcagcggagatcaaaaacctgtttcgcatg
cgcgacgagttcccagagtccgttgtgatcaatctcgagaacaactaccggtcttctgga
tgtattctcaactcggcactggcggtaatcgagcaggatgagagtcgcccacaaaaggct
ctgatagcaacgcatgttgtgggcgaagcaccaacactacgccatctcgtgtcagcacac
attgaggcaaaatggacagttgatgagatcatacggactagaacgctcgcagccggtcta
cttgattacaacgattacgccatcttattgcgctctagtcagctctcactacagttggag
agagctttggctaaagccggggtgccgtacagaatggtcgctggtatcaaattcttcgac
cgtgcggagattaagatcatactggactatttgcgcgtggtcagtcaaccagagcacaac
gatgcggttgcacgggtgatcaatctgccttccaggaaagtgggagatagtacggttaag
gctttgcttgaagaggcggaagtaaagaaagtaacactatggaaacttgtgctcgacatt
gcgcaagggcggatacgatctaattgcaaggtctcgacccaagcccagaaaggtatcgag
cagttcgtcaatgtcattctcacctcgagggagaagttgctgcctactaaaggcgagcat
tgcgacctctacgggctcatcggtcatatcttgcagaagatctctttcgaggcatacctg
aagcaaacccacaaggagaattggaaagaccggtgggacaatgtggaggagcttgtcgct
caagcgacgcagatggctacagctttggctagcggagaagagatcacagacgatgctcta
cctatcgtggaggggatcgaacaacgacaagatacagccgccgatgtgctgtcgaagttt
ctcgcaaacgttactctctcgagtcttgcagaccagaacggtggggaggtggagcaggtc
accatctccacgatacatgctgccaaaggcttggagtggccagtagtattcctacccgca
atgtacgacggctcgataccccattcgcgcgcagatgatcacgacgaggaaagacgactg
ctctatgtcggtatgacacacctggcaaagatcttgcgcagaccttgcccgaccgccgag
gacattgaaactgcacgtgtcggtctggagcgcctggaggatgacttatatcctgcaacc
agggacgagatcgatggcgacgacccaagctggggtacgtcttgggacgacaagttcgac
aaattcggtccaagcagcgaagcagctcaaacagggttcaaacgacgcaaactcgatgct
aatacttcacatgcccacgactcggttgcggtaaccatgaataggacttccggcttctcg
atggcctctaccacaatgcatggcgcaaaaccaggcttcaccaccgctcgtgacctcggt
gatctacaagctatgcagcgggaagcagagcgtgttcgcatgcttgctaccgcaaacgat
gcagaaagagggcgcaaagcataccaagaagacaagaaggcagaaacgaagcctgcgcag
gcgaagaaaaccaagcctcgggcagcaggccaaggtgccatcacgaacttcttcgcgaag
agatccgtcagcacgccttcagaagacacggagcaagtgccacctcttcccacggcatcg
ttgcagcgctcacaatcgtcgctgtcaagcaacaccccattatacgatatctccaacgtt
cagtcttccactgtacgacagccaaagccctaccaatcgctcgcacttccaaactataaa
cttcagaatcgtcccatggcgagcaagcctaagcggaccgagccaccaccggacatggag
aataccagatacgtgctcctgtctagctcacctgtgaagccggattgggaggacaccact
gttggaagtgccgataaggaacaagaacaagccccaccgagtccagtgaagcagtcgtct
tcgtttgtgtcgtcatctggtttcagagctgcgtcggcctttcacactacgtcaatgaac
caagtacagaaccaagcggcacagaggaaaacgctgggtacgcggaggacaatgcagggt
tggagtgtgaagcatagttcgatgccgaagccgcggccatcgtga
DBGET
integrated database retrieval system
