Parastagonospora nodorum: SNOG_00980
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Entry
SNOG_00980 CDS
T01161
Name
(RefSeq) hypothetical protein
KO
K14829
pre-rRNA-processing protein IPI3
Organism
pno
Parastagonospora nodorum
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pno03009
]
SNOG_00980
Ribosome biogenesis [BR:
pno03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
SNOG_00980
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
EIF3I
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
WDR55
Beta-prop_HPS5
Beta-prop_VPS8
Nbas_N
SBBP
Gryzun-like
Motif
Other DBs
NCBI-GeneID:
5967805
NCBI-ProteinID:
XP_001791641
UniProt:
Q0V4T4
LinkDB
All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
MLTEHFVAAISASTKPNTGVTKDAGIFIHEYQPLAAQRHVFKKSATAPNGIAVSSSHVFA
AQAEKAIVHVYSREKGNQEAVIPFPERIHSIALAAQDTVLLLGTESRLVSTSTSHLQPVT
SIAVDPSSNFFLTGSSDAMVHVWALPAILSFSPDTPRTPVHTLSTHRGPISSLVCGHSST
SANIAISTSGDKSAIVWDYHNGHALRTYLLPEAPTAVTLDPADRAFFVAYADGSLQTIDF
YDDVQSTLSTNLLHDPSSSHRPVQPPPKTRFSAESQKLGGALSLTLSWDGTTLVSGHASG
KVAAWDIAKSNYLSTLANLPGPVSNLQLLPPTGFPQDPEQLFKVHTVVKPKHDPGTSAGG
SGLIPPGYTLTMQLTGRLRTERASATDTMLPTKTAFEEALTHPSFPAGMLEESLAELESW
NSASKGATAPASDFMALDDDSNATSSDAHLTEVKELKKQVASLQRIQKVTFTQLSELRTE
REYFLSKEKRRAERAKARAKKSLGHTNGHANGDVEMTGGDNSDDSDSDDA
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgctgacggaacacttcgtggctgccatatcggcgtcgacgaagccgaacacgggcgtc
accaaagacgcgggcatcttcatccacgaataccagccactggccgcccagcgccatgtc
ttcaagaagagtgcgactgcgccgaacggcattgctgtgagcagctcacatgtatttgct
gcacaggcggagaaggccattgtgcacgtgtacagcagggagaaggggaaccaggaggct
gttatacccttccctgagcgcatccacagcattgctctggcagcacaagacacagtgctg
ctgctaggcaccgagagtcgcctcgtctctacgtccacttcccatctccagccagtgacg
tccattgccgtcgacccctcgtccaacttcttcctcaccggctcgtccgacgccatggtc
catgtctgggcactgccagcgatcctgtccttctctccagacaccccacgcacgccggtg
cacactctgtccacccaccgcgggcccatctcgtctcttgtgtgcggacacagctcgacc
agcgcaaacattgccatatccacctcgggagacaagtctgccattgtatgggactaccac
aacggccacgcactgcgaacatacctgcttcctgaggcacctaccgcagtgacactggat
cctgctgaccgtgcattctttgtcgcctatgccgacggaagcctgcagacgatcgacttc
tatgacgacgtccagagcacattatccaccaacctcctgcatgacccctcctcgtctcat
cgcccagttcaacccccaccgaagaccaggttcagtgccgaatctcagaaactcggagga
gcgctcagtctgacgttgagctgggatggcacgacgcttgtctcaggccatgcaagcggc
aaggttgcagcttgggatatcgcgaagagcaactacctgtcaacgctggccaaccttccg
gggcctgtctccaatctgcaattgctccccccgaccgggtttccccaggatcccgaacaa
ctcttcaaggtgcacacagtagtcaagccgaaacatgatccgggaacatccgctggagga
agtggcctaattccaccgggctatacgctcaccatgcaattgaccggtcgccttcgtacc
gaacgcgcgtctgctaccgacacgatgcttcccaccaagactgcatttgaggaggccttg
actcatccttctttccccgcaggcatgctagaggagagtcttgccgagctagagtcatgg
aactccgcttccaagggggccactgcgccagcctctgacttcatggcactcgacgatgac
tctaatgccacttcttctgatgctcacctgaccgaagtcaaggaactcaaaaaacaagtt
gctagcctgcagcgcatccagaaggtcactttcactcagctctccgagctacgcacagag
agggagtatttcttgagcaaggaaaagaggcgagcagaacgtgccaaagcacgagccaag
aagtcattgggtcacactaacggccacgcgaatggagacgtagaaatgactggtggcgac
aactccgatgattcagactcggacgatgcttga
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