Entry |
|
Name |
(RefSeq) hypothetical protein
|
KO |
K11595 | chromo domain-containing protein 1 |
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Organism |
pno Parastagonospora nodorum
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Brite |
KEGG Orthology (KO) [BR:pno00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:pno03036]
SNOG_01621
Chromosome and associated proteins [BR:pno03036]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
SNOG_01621
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
1004 aa
MVGSDLEYDTDNISLTSTVESQHDQIYDIKRILSEGWGKDEQGEDVMKYLIEWEGYPMKD
CTWEPEYNLEETGLLTPWAKQKARMGSKAFQKFTEDNEDAFEKAFEKHKRLHATRKQKRA
KKRNRPRRNKRVVEDSSSEDDVTERQQNLAGQAKSKSSEAVPTHNQEVYNSLFVDSQDSN
PLGQPPTLDQLERDSAAEGPPAARTPFIESSTDDGDDTASDDSSDSLLAELASKAKGQTR
SKSRGKKATGLASPILAPTRSRQKVPKPSPQPAAPAANQPTVEAAVQKPAKPNPTPATTP
ATTTVSTGARKAHVSGVPPSSRKTGTASKAAPPIKFTNQKQEPQRSKWDTKGVLYNKAHF
RAKAEQRSRYEGTPDPTVLEFVGSGPPNLVKPKPSRPVDDPYSRRETGNRRVESSDEDES
TGRGGHQYFDLMHDWEKDKLPLVCPEWRLSSNCPYTARICKYLHRNKDGNGRDIEVANID
GKLPPKMRIPPVTCFYWMTGPRGCRKTDAECKYAHYNTGWLPIENDTAPIRIDPDEKPLS
EQRQEIARPSAGRIPSTNRNTGPIPTGPKEGLPSGQRPVAGWNVKKTCWYWANGGCEKSD
ELCSFHHYDTGVVADLGRRLPTSLEMKLKIEKVLKTDFSHMFQWSQDEGEKSMLDRKAFL
LYHPVDNQEELELMTRWLMLHHVEVRNAYFEGAWRQYAREHVEQKSSSGILVVRVWSVGR
QEGIEYDPATSLPPPEKCQECIELFPAGGFIYITDDVFEVRPRQALEIVKLFIAKIESLR
DPEYAQNPWQEVDNINLHWRICVRPELMEYLFAKCEEQAKALEAGESDAMARAELYTLLS
DTEYIEQDSPVLPLSQKADKFPIMSERRVVAKNEPIDYFNSLARSHEKANLRMIRYYTAL
HMDLRRDYRHFYIVHTDPFSTPAKQWLRECSTITDVINPERCILELSKDGHDGEERCFDF
YEKYLMPTKDETVPLTQVKQVTLIQEEDVMESQSSLESGEICSS |
NT seq |
3015 nt +upstreamnt +downstreamnt
atggtcgggtcggacctggagtatgacacggataacatctcgctcacctcgaccgtagaa
agccaacatgatcagatttacgacattaaacgcatcctttcagaaggatggggcaaggac
gagcaaggcgaggacgtgatgaagtacctcattgaatgggaaggctaccctatgaaagat
tgcacatgggagccagagtacaatctcgaggagacaggattgctaaccccttgggcaaaa
caaaaagcgcgcatgggttcaaaggctttccaaaagttcaccgaggacaacgaagatgcg
ttcgaaaaagcatttgagaaacacaagaggctccatgccaccaggaagcaaaagcgcgcc
aagaaacgtaacagacccagacgcaacaagcgggtcgtcgaagacagcagcagcgaagac
gatgtcactgaaaggcagcaaaacctggccggtcaagccaagtccaagtcatcagaagca
gtccccacccacaatcaagaagtctacaacagtctttttgtagatagccaggactcaaac
ccccttggacagccacccactttagatcaactcgaacgtgactctgctgctgaaggccca
ccagcggctcgtacaccattcatagaatcctcgacagacgatggagatgacacagcatca
gacgactcatcagattctttattggctgagttggcctcaaaggcgaagggccagacccgt
tcaaagtcacgaggcaaaaaggcaacaggtcttgccagcccgatactggcacccacgcgt
tcacgccaaaaggtcccaaaaccttcaccccagccagcagcgccagccgcaaatcagcca
acagtagaagccgcagtacagaagccagctaaacctaatcccacacctgcaaccacaccc
gcaaccacaacagtctccaccggtgctcgtaaagcacatgtctcaggagtcccaccgtcg
tcgaggaagactggaacagcttctaaggcagctcctccgatcaaattcacgaatcaaaag
caggagccacagaggagtaaatgggacacgaagggcgtactgtataacaaagcccatttc
agggcaaaggctgaacaacggtctcgttacgagggcacacctgatcccaccgtcctcgag
ttcgttggttccggtcctcctaatctggtcaaaccgaagccatcgcgtccagttgatgac
ccttactcacgtcgtgagactgggaatcgtcgcgtggagtcatcggacgaagatgagtct
actggaagaggtggtcatcaatattttgacctcatgcacgactgggaaaaggataaactc
cctctagtctgtcctgaatggagacttagcagcaattgcccttacaccgccaggatctgc
aaatatctgcaccgcaacaaagacggcaatggtcgtgacattgaagtcgctaatattgac
gggaagctaccgccgaagatgcgcataccgccagtgacatgtttctactggatgacagga
ccgcgtggatgtcggaaaactgatgcggaatgcaaatatgcacactacaacacgggctgg
ctaccaatcgaaaatgacactgcaccgatacgcatagaccctgacgaaaaacccttgagt
gagcagagacaagaaattgcgcgccccagtgcaggccggataccaagcactaatcgcaac
accggaccgatccccacagggcccaaagaaggactaccgagcgggcagagaccagtcgct
ggatggaatgtaaaaaagacctgctggtactgggctaatggaggctgcgagaaatcggac
gaattgtgcagcttccaccactacgatacaggcgtcgttgcggacttgggacgcagactc
cctacaagtttggagatgaaactcaagattgaaaaggtgctgaagacagatttttcgcat
atgttccaatggagccaggacgagggagagaaaagtatgctcgatcgcaaggcgttcctt
ctataccatcctgtcgataaccaggaggaacttgagctcatgactcgctggcttatgcta
catcatgtagaagtgcgcaacgcttattttgaaggtgcctggaggcagtacgcgcgcgaa
cacgttgagcaaaagtccagctccggtatcttggttgtccgcgtatggtcggttggaagg
caggaaggcattgagtatgatcctgctacatcgctccctccgcctgagaaatgccaagag
tgtatagagttgtttccagctgggggctttatctacatcaccgatgatgttttcgaggtc
cggcctcgtcaggccttggagattgtcaagctgttcattgcgaagatcgagagtttgcgc
gatcccgagtatgcccaaaacccatggcaagaggtcgacaacatcaatctgcactggcgt
atctgcgtgcgtccagagctcatggaatacctcttcgcaaagtgtgaagagcaggcgaag
gcactggaagccggcgaatcagacgcgatggctcgagctgagctctacacacttctcagt
gacaccgagtacattgagcaagactcgcccgtcctgccactgagtcaaaaagccgacaag
tttcccatcatgtcggaacgtcgcgtcgttgctaagaacgagcctatcgattacttcaac
tcgctcgctcgcagccatgagaaggctaatttgcgcatgatccgctactatacggctcta
cacatggaccttcgccgcgactatcgtcatttctacattgttcatactgacccattctct
actcctgcaaaacaatggctgcgggaatgctccaccattaccgacgttataaaccccgag
aggtgcatactggaactttcaaaggacgggcatgacggcgaggaacgatgctttgacttc
tatgagaagtacttgatgccgacaaaagacgagactgtacctctaacgcaggtcaaacag
gtgaccctcatccaggaggaggatgtaatggaaagccagtcatcgctggaaagtggcgag
atatgttcatcttga |