Parastagonospora nodorum: SNOG_01766
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Entry
SNOG_01766 CDS
T01161
Symbol
SNOG_01765
Name
(RefSeq) hypothetical protein
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
pno
Parastagonospora nodorum
Pathway
pno03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SNOG_01766 (SNOG_01765)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pno03021
]
SNOG_01766 (SNOG_01765)
Enzymes [BR:
pno01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SNOG_01766 (SNOG_01765)
Transcription machinery [BR:
pno03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
SNOG_01766 (SNOG_01765)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
5969240
NCBI-ProteinID:
XP_001792395
UniProt:
Q0V2J8
LinkDB
All DBs
Position
Unknown
AA seq
1443 aa
AA seq
DB search
MPFYSINGDELTVLGRQLDTVALVVHVPHKTLSQPDSAVLDAISKWLLLVRGLSGLKQRS
TWDAKALDLLYLVKQDARNDESSLSQRARLLSWYRDLVADGLRVGTKPKDHYNRNDLEGE
DDIDSIQVDLQHRICGKRLLFVTKNGRYGTGSLNIQEGDTVHVVSGVPTPLCMRRQANAD
VYEIAGPAIMNYDSSDDIWQGRLNRIVLFRHGGQEGTLLLQVLGGDGELTCAQEPTKPKP
KAPPRRTAAKTQAPLPQVGKADDDGDAMEVDGGAVQPPPAVVENAPDVNPGASTSAEQTR
KRKAPLTHGTDEFAALLEPFYYGKSLTDPINTARDKWNLLPAFLKTKGLVKQHVDSYNHF
VDVELKKIIKANRFVRSDFDPKFLLEYTDIRVLSPNRQEEDDLDNHRSTVTPNECRLRDM
TYAAPIVVDIVYTRGSAKVKRTGIKIGRMPIMLKSNKCVLAAKNDREMAVMDECPLDPGG
YFITRGQEKVILVQEQLNKNRVIVESAKGIMQASVTSSTHERRTKTYVIQKKGLMFLRHN
TLSEEVPIVFVLKALGVHSDKEILLMIAGTDAAYQDSFAINFEACAREGIHTQEKALEYI
GHRVRLVKKPLGTSRMRNYHLEAIECLANVVLPHVPVEGTNYRPKALYVALMARRVLMAM
QDPKLVDDRDYVGNKRLELSGQMLSLLFEDHFKRFNHDFKLSIDKVLKKQNRAQEFDAFS
HFSVHKNHITMGIERAIATGNWSLKRFKMDRAGVTHVLSRLSYIAALGMMTRISSQFEKT
RKVSGPRALQPSQFGMLCTSDTPEGEACGLVKNLALMTHITTEDDEDPVRKIIFLLGAEE
ICSQTGEEIHREGVYSVCLNGTPIAITDIPKRFLNSFRKLRRMGRISEFTSIHINHDFCE
VHVATDEGRICRPMIVVENQRSKVTGRYLKALRKGTMEFEDFLTRGLVEYLDTNEENDTN
IALKETDINQHTTHLEIEPFTILGAVAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQF
SRIDTILYLMVYPQEPMVKTRTIELTKYDKLPAGQNATVAVMSYSGYDIEDALILNKASC
DRGFGRCQVMKKVSHQLKSYANGTSDRINAGALKVDDPTHQAIGQDGIAQVGARINQGDA
FLLKAIPQDTAGPPSTTYKDKPEKYKLPDCSYIDKVCITENEAGTTLIKILNRQTRRPEL
GDKFSSRHGQKGTTGLIVQQEDMPFNDQGINPDIIMNPHGFPSRMTVGKMMELLSGKAGV
LNGTLEYGTAFGGSRVEDMADILVSKGFSYTGKDYLTSGITGEAHQFYTFFGPIYYQKLK
HMVQDKMHARARGPRAILTRQPTEGRARDGGLRLGEMERDCLIAYGASQLLLERLMISSD
AHNVDVCEKCGQMGYSGYCKLCESEKAVRRITMPYAAKLLIQELGSMNVKVTIGLADEFP
RES
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atgcccttctactccatcaatggggacgaactcactgtattgggacgccagctggatacc
gtggcgctggttgtgcatgttccgcataagaccctgtcgcaacctgattctgccgtgctg
gatgcaatttccaaatggcttctgttggtgcgtggtctatccggattgaagcagagaagt
acttgggacgcaaaagccctcgatctactttacctggtaaagcaagacgcgaggaatgat
gagagtagcttatctcagcgagcgagactcctgtcatggtaccgggatctcgttgcagat
ggtctacgagtcggcacgaagcccaaagatcattacaaccgcaacgaccttgagggtgag
gacgatattgattcgatacaggtagatcttcaacaccgtatttgtggcaaaagacttctg
ttcgtcaccaagaatgggcgttatggaacgggctcgctcaacatccaagaaggcgacaca
gtacatgttgtctccggcgttcctacgccgttgtgcatgaggaggcaggcaaacgctgat
gtgtacgagatcgcaggacccgctatcatgaactatgacagctctgatgatatctggcaa
ggtcgcttgaatcgcatcgtgttgtttcgacatggcgggcaagaaggtacgctgctgctt
caagttttgggtggcgatggagagctgacatgcgcccaggagcccacgaaacccaagccg
aaagctcccccacggcggacagcggcgaaaacgcaagcccctctaccacaagtaggaaag
gcagatgatgacggcgatgctatggaggtggacggcggcgctgtgcagcctccacctgca
gtagtagagaatgcgccggacgtaaacccaggagcctcgacatctgccgaacagacgcga
aaacggaaggcgccacttacccatggcaccgacgaatttgctgctctccttgagcccttc
tactacggaaagagcttgaccgaccccatcaacactgcgcgcgacaagtggaatttatta
ccggcgttcctgaagactaagggtcttgtgaagcagcatgtggactcgtacaatcacttt
gtggacgtggagctgaagaagatcatcaaggcgaaccgatttgtgcgcagcgacttcgat
cccaagttcttactggaatacacagacatccgcgtcttgtcgccgaacaggcaagaggaa
gacgatctcgacaaccatcgcagtacggtgacgcccaacgaatgtcgacttcgcgatatg
acatatgcggcgcccattgttgtggatatcgtgtacacaagaggaagcgcaaaggtgaag
cggacgggcatcaagatcgggagaatgccaattatgctgaagagcaacaagtgcgttttg
gccgcgaagaacgaccgcgagatggctgtcatggatgagtgtccgctggatccgggaggc
tactttatcacacgagggcaagagaaagtcattctcgtgcaggagcagctgaacaagaat
cgtgtcattgtcgagagcgcaaagggtatcatgcaggctagcgttacgagttctacacac
gaaaggcgaacgaagacgtatgtcatccagaagaagggactcatgttcctgcgacacaac
acgttgtcagaggaagtccccatcgtcttcgttctgaaggcacttggggtacactcggac
aaggagattttgctcatgatagcaggcaccgatgccgcatatcaagacagcttcgccatc
aacttcgaggcgtgcgcaagagaaggaatccacacacaggaaaaagccctggaatacatt
ggacaccgcgttcgactagtgaagaagcctctcggaacctcacgtatgcgtaattaccac
ctcgaagctatcgaatgtctggccaacgtcgttctaccgcacgttcctgtcgaaggtact
aactaccgaccaaaggctctctacgttgcattgatggctcgtagagtgctaatggcgatg
caagacccgaagctggtagacgatcgtgattatgtcggaaacaagcgtcttgagctgtcc
ggccaaatgttgtctcttctcttcgaagaccacttcaagcgcttcaaccacgacttcaag
ctgagcatcgacaaggtgctcaaaaagcagaatcgcgcacaggagttcgacgccttctcg
cattttagcgtacacaagaaccacatcaccatgggcatcgagcgcgccatcgctactgga
aactggagtttgaagcgtttcaagatggaccgggctggtgtcactcacgtattgagcaga
ttgagttacatcgcagcgcttggtatgatgacaagaatcagttcccaattcgagaagact
cgcaaggtctctggtcctcgtgcactgcagccttcgcaatttggcatgttgtgtacgtcc
gatacccctgaaggtgaagcctgtggtttggttaagaacttggccttgatgacgcacatt
acaaccgaggacgacgaagaccctgtgcgaaagatcattttcctgctaggtgccgaggaa
atctgctcacaaacaggagaagagatccaccgtgaaggtgtgtatagtgtgtgtctcaac
ggtacgccgattgcgatcacagatataccaaagcgcttcttgaacagcttccgaaagctg
cggcgaatgggccgtatatcggaatttactagcatccacatcaaccacgacttctgcgag
gtacacgtcgccacagacgagggtcgtatttgccggcccatgatcgtggtcgagaaccag
cgctcaaaggtcacaggccggtatctgaaggctctgcgcaaaggcacaatggagtttgaa
gactttttgacacgggggcttgtcgaatacctggacacgaacgaagagaacgacaccaac
attgctctgaaggagacggacatcaaccaacatacaacccatctcgagatcgaaccgttt
actatcctcggtgccgtcgctggtctcatcccctacccacatcacaaccagtcgcctcgt
aacacctatcaatgtgctatgggtaagcaagccattggcgccatcgcgtataaccagttc
agtcgaattgacaccatcctctacctcatggtctacccgcaagagcccatggtcaagact
cgcaccattgagctcacgaaatacgacaagctaccagccggtcaaaatgctaccgtcgca
gtcatgtcttactccggctacgatattgaggatgcgctcattctcaataaggcatcttgt
gatcgtggcttcggacgctgccaggtcatgaagaaagtctcgcaccagctcaagtcttat
gccaacggcacttcagaccgcatcaacgccggcgccctcaaggtcgacgatccgacgcac
caagccatcggtcaagatggtatcgcccaagtcggtgcacgcatcaaccaaggtgacgca
ttccttctcaaagccatcccccaagatactgccggcccaccctcaaccacctacaaagac
aagcccgagaaatacaagctccccgactgttcctacatcgacaaagtctgtatcaccgag
aacgaagccggcacaaccctgatcaagatcctcaaccgccaaacccgccgcccggaactc
ggcgacaaattctcctcccgccacggccaaaagggaaccacaggcctcatcgtccagcaa
gaagacatgcccttcaacgaccagggcatcaaccccgacatcatcatgaacccccacggc
ttcccctcgcgtatgaccgtcggcaaaatgatggaactcctctctggcaaagctggcgtc
ctcaatggcaccctcgaatacggcaccgcgttcggcggctcccgcgtcgaggacatggcc
gacatcctcgtttccaagggcttttcttacacgggcaaggactacctcacctccggcatc
accggcgaagcgcaccagttctacaccttcttcgggccgatctactaccagaagctcaag
cacatggtgcaggataagatgcacgcgcgtgcgcgcgggccccgcgctatcctgacgcgc
cagcccacggagggcagggcgcgcgacggtggactgagactgggcgagatggagcgcgat
tgtctgattgcgtatggggcgagtcagttgttgctcgagcggctgatgatcagctcggat
gcgcataatgtggatgtttgcgagaagtgtgggcagatgggatacagcgggtactgcaag
ctgtgcgagagcgagaaggcggtgcgaaggattaccatgccgtatgcggcgaagctgctg
attcaggagctggggagtatgaatgtcaaggttacgattgggctggcggatgagtttccc
agggagtcgtag
DBGET
integrated database retrieval system