KEGG   Parastagonospora nodorum: SNOG_01804
Entry
SNOG_01804        CDS       T01161                                 
Name
(RefSeq) hypothetical protein
  KO
K10755  replication factor C subunit 2/4
Organism
pno  Parastagonospora nodorum
Pathway
pno03030  DNA replication
pno03410  Base excision repair
pno03420  Nucleotide excision repair
pno03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pno00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SNOG_01804
   03410 Base excision repair
    SNOG_01804
   03420 Nucleotide excision repair
    SNOG_01804
   03430 Mismatch repair
    SNOG_01804
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pno03032]
    SNOG_01804
   03036 Chromosome and associated proteins [BR:pno03036]
    SNOG_01804
   03400 DNA repair and recombination proteins [BR:pno03400]
    SNOG_01804
DNA replication proteins [BR:pno03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    SNOG_01804
  DNA Replication Termination Factors
   ELG1-RFC complex
    SNOG_01804
Chromosome and associated proteins [BR:pno03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    SNOG_01804
DNA repair and recombination proteins [BR:pno03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     SNOG_01804
  Check point factors
   HRAD17(Rad24)-RFC complex
    SNOG_01804
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_lid_RFC1 AAA_14 AAA_22 Viral_helicase1 nSTAND3 RuvB_N AAA_16 RCF1-5-like_lid AAA_3 Mg_chelatase nSTAND_NTPase5 DNAX_ATPase_lid AAA_assoc_2 AAA_19 AAA_11 TAdV_Fibre-like_head MeaB NTPase_1 Gp44_lid NB-ARC nSTAND6
Other DBs
NCBI-GeneID: 5969275
NCBI-ProteinID: XP_001792430
UniProt: Q0V2G0
LinkDB
Position
Unknown
AA seq 376 aa
MAKPESKAESSKTASSGIKPNPNAAGGANYELPWYSPLLSLSQSIPTNKGGRVEKYRPVY
LDDVVGNTETIERLKIIAKDGNMPHMIISGMPGIGKTTSILCLARQLLGDAYKEAVLELN
ASDERGIDVVRNRIKGFAQKKVTLPPGRQKLVILDEADSMTSGAQQALRRTMEIYSATTR
FAFACNQSNKIIEPLQSRCAILRYARLTDAQVVRRIMQVIEAEDVKYSDDGLAALVFSAE
GDMRQAINNLQSTNAGFGFVNGDNVFKVVDSPHPIKVQVMIKACHETRINDAMVSLKELW
DLGYSCHDIISTMFRVTKTIDTLSEHAKLEFIKEIGFTHMRILEGVQTLLQLSGCIARLC
KINMQPQLFVLPSKSK
NT seq 1131 nt   +upstreamnt  +downstreamnt
atggcgaaaccagagtccaaggccgaatcttccaagacagccagcagtggcatcaagcca
aacccaaatgctgctggaggagcaaattacgagttgccttggtacagtccacttctctct
ctctctcagtccatcccaactaacaagggcggcagggtcgaaaagtaccgcccagtctac
ctcgacgatgtcgtcggcaacactgaaacaatcgagcgcctcaagattattgcaaaagat
ggaaacatgccacacatgatcatctcgggtatgcctggtatcggaaagacgacctcgatt
ctctgccttgcgcggcagttgctcggcgacgcatacaaagaagccgtccttgaactcaat
gcctctgacgaacgtggtattgatgtcgtgcgtaaccggataaagggctttgcgcagaaa
aaggtcactctgccgcctgggagacaaaagctggttattctggatgaagcagacagcatg
acgagtggtgcacaacaggcgcttcgacggacaatggagatttacagtgcgaccacaaga
tttgcattcgcatgcaatcagtccaacaagatcatcgagccgctgcagtcgagatgcgcc
attctacgctacgcccgtctcaccgatgcacaagtcgtgcgaagaatcatgcaagtcatt
gaggctgaagacgtaaaatactctgacgatggcctcgcggcgctggttttctctgccgaa
ggagatatgcgacaggcaatcaacaacctgcagtcaacaaatgcgggttttggattcgtc
aatggagacaatgtgttcaaggtggtggatagcccgcatcccatcaaggtgcaggtaatg
attaaggcatgccacgagacgagaatcaacgatgcaatggtgtcgttgaaggagctatgg
gatctggggtactcatgtcacgacatcatcagcaccatgtttagggttacaaagacgatc
gatacgttgagcgagcatgcgaagctggaattcatcaaggaaatcggcttcacacacatg
cgcattctcgaaggcgttcagactctcctccaactctccggctgcatcgcgcgcctctgc
aaaatcaacatgcaaccacaactcttcgttctaccatcaaagtcgaaatag

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