Parastagonospora nodorum: SNOG_02541
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Entry
SNOG_02541 CDS
T01161
Name
(RefSeq) hypothetical protein
KO
K14309
nuclear pore complex protein Nup93
Organism
pno
Parastagonospora nodorum
Pathway
pno03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SNOG_02541
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pno03019
]
SNOG_02541
Messenger RNA biogenesis [BR:
pno03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
SNOG_02541
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
5969993
NCBI-ProteinID:
XP_001793143
UniProt:
A0A7U2HUK3
LinkDB
All DBs
Position
Unknown
AA seq
1132 aa
AA seq
DB search
MSSLFGRLGGGQPASSAAPASGTPASQSLFGNAGNNTSSGTGSSLFGGNPGGGTPGAAAG
PSQPASTGGFGSSLFGGALGSAKPASSSTFPALGATSTSQPQTQTGGSFSLFAKPATTQQ
STMNNQQQTSGLGQSSLFGTASTQQQPQQQQGASLSQSNAGTTRSAHFDNLLERGRKRNA
GENGGSNFEELPSLQLGLGDIARKVRNLGAGGPSADHVRDGAQDRAAHYLLSASGVKLGS
TLRDLNQFSTQAGIGANGMAQNLFDTDVDGYISNLHSQSTLSLIQEGLEQSKRDFDAFLE
DNVQIEWDKQRQRIYEHFGLGRQNEDMAASQSAFGSTARGAFGRSTRKGRSMGPKGASTN
GASTFGASVGGPPVIGNGQSVLNGREGHGASVLGTQAGPRDRYERDKQERFMEEVKKLND
ARQREAPYSILHAFSEVERTTGTEHSEQFVLAYRALVSITREASESESSNPESNNPRPRS
FVRDYLEDQPNSAGSLRIRKRILDGSRTFLETRFLEQVDATLKKHPNEALVGGVPSLLNK
IRGYIRAKIAFKEFGEDTDCLQKIGDSGDEYPWLIVFFLLKAGLSAEAADYVREKRNFFQ
NTDRNFQAALSHYATDPDRRLSPDLHQKIGHVFAQRARLQSQVDDPYRTACYKIVGRCDL
SRRSLNPIKETMDDWIWLQFNLAREGNRAEENAGEIWGLEELRSSIRDIGQKHFSEDADS
AGGYGVYFYLTTLAGMFESGLGYLYNHNYVSTVHFAIALDYYGLLRVSDWATGGSEVLTY
TTRQQPQLNFGRVVGAYTADFRAARADAAADYLVLICLNSDLPGDAGKQQTELCHEALRE
LVLETREFSTLLGDVKSNGMTTPGLIQERVPLLKLNGENGLLNTITREAAKMADDNGRTN
DAILLCHLAGEYDSVIAILNRSLAEALSVELGQEPLRLEPLKPRLTPMEAQQQQQRQVSD
STSISMLGTDDPVELAQKVLALYDANSLWWRQVSQSNRETVGILYNLNEIKKIIEAGDYL
TALQRLENINILPLQAKGNLSEIRKSANAFAGYPPEIARNIGNVLLWTIGCCSRHREHLL
AGAFVDQMRRNIADSLLQQAKDLMVFAGLIRYKLPPRVFETLAREGQDVGAY
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgcttttcggtcgtcttggaggcggacagccggcatctagtgcagcacctgcg
tcaggcactcctgcatcacagtcgctgttcggaaacgcgggcaacaacacatcgtcaggc
acaggatcgagcttgtttggcggcaatccgggcggaggtactccaggcgcagcagcgggc
ccgtcgcagccagcaagcacagggggctttggaagcagtctgtttggaggcgcccttgga
agcgcgaagccagcatcgtcatctaccttccctgcactgggcgcaacatcgacgtcgcaa
ccgcaaacgcaaactggcggttccttcagcttgttcgccaaacccgcaacgacgcagcaa
tcgacaatgaacaaccagcagcaaacaagcggcctcggacagtcctcccttttcggcact
gcttcgacacagcagcagccgcaacagcagcagggcgcctctctatcccagtcaaacgcc
ggtaccacgcgctcggcgcactttgacaatctcctcgagcgtgggcgcaaacgcaatgct
ggcgagaacggagggagtaacttcgaggagctgccatcgttgcagctgggactgggcgac
attgcgcgcaaggttcgcaacctgggcgctggcggcccttccgcagatcacgttcgagat
ggcgcacaagaccgtgcagcgcactaccttctctcggcctcgggtgtgaagctgggcagt
acccttcgcgatctgaatcagttctctactcaagccggcattggcgcgaacgggatggca
cagaacctcttcgacactgatgtcgatggctacatctcgaacctccactcgcaatccacg
ctctcactcatccaagaaggcctggaacagtccaagcgtgacttcgacgccttcctcgaa
gacaatgtccagatcgagtgggacaagcaaagacagaggatctatgagcatttcggtctg
gggcggcagaatgaggacatggcagcttcccagagcgccttcggcagcactgcgagggga
gctttcgggcgttcgacccgcaagggccgttccatggggccaaaaggcgcgtctacaaat
ggggcctcgacatttggcgcgtcagtcggcggcccacccgtcattgggaatgggcagagt
gtgctcaatgggcgtgaaggtcatggtgcgtccgtactgggaacacaagccggccctcgg
gaccgctatgagcgagacaagcaagagaggttcatggaggaggtcaagaaactcaacgac
gcacgccaacgggaggctccttactcaattctccatgcgttctccgaggtggagagaacg
actggcaccgagcattcagagcaatttgtcctagcgtacagagcgcttgtctcgattacc
agagaggcgtctgagtcggaatcgtctaatcctgagtcgaacaaccccaggccccgaagt
ttcgttagggactacctcgaagaccagccgaactcagcagggagccttcggatacgcaaa
cggattctagacggctcccgtacatttttggagacgcggttcttggagcaagtagatgcg
acgttgaagaagcatcctaacgaagcgctcgtcggtggtgttccttctctattgaacaaa
attcgcggttatattcgagccaagatagccttcaaggaatttggcgaagacacagactgt
ctccagaaaatcggtgattctggagacgagtacccttggctcattgttttcttcttgctc
aaggcaggcttgtccgctgaagcggccgactacgtgcgagagaagcgcaatttcttccag
aacaccgacaggaacttccaggcagctctatcacactacgcaaccgatccagatcgacgg
ttgagccccgatctccatcagaagataggccatgtcttcgcccagcgagctcgtctccaa
agtcaggtagatgatccctaccgaactgcttgctataagatagtcggccgctgtgatttg
agccgtcgaagcttgaatccaatcaaggagactatggacgactggatctggttacagttt
aacctggctcgtgaaggcaaccgtgccgaggagaatgctggcgagatctggggcctggaa
gagttgcgatcctccattcgcgacattggccagaagcacttcagcgaagacgctgattcg
gcgggcggatacggcgtctacttctatcttacaacgcttgctggtatgtttgagtcaggc
cttggttatctgtacaaccacaactacgtttcgacggtccatttcgcgattgcgctcgat
tactatggtctactcagagtatccgattgggctaccggcggctccgaagttctgacatac
accacgcgacaacagccacagttaaactttgggcgtgttgttggtgcatataccgcggac
ttccgagctgctcgggccgatgctgcggctgactatctggttctgatctgcttgaactcg
gatctaccaggcgatgctggtaagcagcagacggagctatgccacgaagctttgcgagaa
cttgttctcgaaacacgtgagttctcaacgttactgggcgatgtcaaatccaacggtatg
actactcctggtctcatccaggaacgtgtgccgttgctcaagctcaatggtgagaatggc
ctgctgaacacaatcactcgagaggccgccaaaatggcggacgacaatggccgcaccaac
gatgccatcctgctttgccaccttgctggcgagtatgacagcgtcattgctatcttgaat
cgctcacttgctgaagcactgtcggtggagcttggtcaagagccattgcgcttagagccg
ctgaagccgcgcttgactcctatggaagcgcagcagcagcagcaacggcaagtgtccgac
tccactagtatcagcatgctcggcacagatgaccctgtcgagctcgctcagaaggtactc
gccttgtatgacgcaaacagtctgtggtggagacaggtctcgcaatccaatcgcgagact
gtgggtatcttgtataatctcaacgagatcaagaagatcatcgaggccggtgactacctc
actgctctacagcgtctggagaacatcaacatacttcctttacaagccaaaggcaacctt
agcgaaatccgcaagtcggctaacgcttttgctggctacccgcctgagatcgcgcgaaac
attggcaacgtgctgctctggactattggctgctgttcgcggcaccgcgaacatctcctg
gctggcgcgtttgtggatcagatgcgcaggaacattgcagactcattgctgcaacaggcc
aaggacctgatggtgtttgcgggtttgattagatacaagctgccgccgagggttttcgag
acgttggcgagagagggacaagatgtcggtgcctactaa
DBGET
integrated database retrieval system