KEGG   Parastagonospora nodorum: SNOG_02569
Entry
SNOG_02569        CDS       T01161                                 
Name
(RefSeq) hypothetical protein
  KO
K11806  DDB1- and CUL4-associated factor 13
Organism
pno  Parastagonospora nodorum
Brite
KEGG Orthology (KO) [BR:pno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pno03009]
    SNOG_02569
   04121 Ubiquitin system [BR:pno04121]
    SNOG_02569
Ribosome biogenesis [BR:pno03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    SNOG_02569
Ubiquitin system [BR:pno04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     SNOG_02569
SSDB
Motif
Pfam: Sof1 WD40_CDC20-Fz WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_RIG_2nd Beta-prop_EIPR1 EIF3I WD40_RFWD3 ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st WDR90_beta-prop_4th Beta-prop_IFT122_1st MIOS_WD40 Beta-prop_TEP1_C Beta-prop_HPS5 Beta-prop_WDR75_1st NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N Beta-prop_DCAF12 WD_LRWD1
Other DBs
NCBI-GeneID: 5970030
NCBI-ProteinID: XP_001793173
UniProt: Q0V095
LinkDB
Position
Unknown
AA seq 437 aa
MKIKALSRSASSAQAPGSNVAKVTRNLDPNQHPFERAREYTRALNATKVERMFAQPFVGD
FEPGHVDGVYSFAKDPNSLDHFAIWDFAGRQEKWQAQAHENLVKGMCWTRDKKLITCGAD
RQVQLFEPYSQASKTAPKATWHGNTAFTSVSHHRTLPSFAAASSTISIYDTTRTSGAPVQ
SMVWPSAIDTINHVSFNQVETSILASSATDRPLILYYLRTSMPLHRTVLTFASNCISWNP
MEAYNFAVANEDHNAYIFDMRNMKRALQVLKGHVAAVMSVEFSPTGEELVTGSYDRSVRL
WERQKGHARDIYHTKRMQRVFSVAWSPDNNYVLSGSDDGNVRLWRARASERQGVKSYALQ
QKLQYDEALKERYKHMPEIKRIARHRHIPTTVKKAGEIKAEELKAIKRREENERRHTKKG
QTRRKAEREKMVLAREQ
NT seq 1314 nt   +upstreamnt  +downstreamnt
atgaagatcaaggccctcagccggtcggcttcgtcggcgcaggcacctggatccaatgtg
gcaaaagtcacgcgcaacctcgaccccaaccagcatcctttcgaacgcgcccgcgagtac
acacgagccctaaatgcgaccaaggtcgagcgcatgtttgcgcagccttttgtcggcgac
tttgagcccggtcatgtcgacggtgtatactcttttgccaaggatccgaattcgctcgac
catttcgcaatatgggactttgccggcaggcaagaaaagtggcaagcacaggcgcatgaa
aacctcgtcaaaggcatgtgctggacaagagacaagaagttgattacctgtggtgcggac
cgtcaggtgcaattgttcgaaccatactcgcaggcctcgaaaacagcaccaaaggcgaca
tggcacggcaacacagccttcacatctgtttctcaccatcgcacactaccatctttcgcc
gctgcctcgagtaccatctccatatacgataccactcgcacctctggtgcaccagtccag
agcatggtttggccttctgcgattgacaccatcaaccatgtctctttcaaccaggtcgaa
acttcaatacttgcgtcttccgcaacagatcgtcccctaatcctgtactatctacgcact
agtatgccgctacaccgcacagtgctcacctttgcatcgaattgcatatcttggaatcct
atggaggcatacaatttcgctgttgccaatgaagaccacaacgcatatattttcgacatg
cgaaacatgaaacgcgcgttgcaagtgctcaaaggtcacgtcgcagctgtgatgagcgtc
gagttcagcccaacaggagaggagttggtgacaggctcctacgaccgctcggttcgcctc
tgggaacgacaaaagggtcatgcacgcgacatctaccacaccaagcgtatgcagagagtc
ttctcggtcgcctggtcaccagacaacaactacgtactcagtggttctgatgatggtaac
gtgcgtctttggcgcgcaagagcttcggagcgacagggcgtcaagtcctatgctctgcag
cagaagctacaatacgatgaagcgctcaaagagcgatacaagcacatgcctgagatcaag
cgcatcgccagacacagacacatccccaccaccgtcaagaaggctggcgagatcaaggcc
gaggagcttaaggcgattaagagaagggaggagaatgagaggaggcacacgaagaagggc
cagacccgacgaaaagcggagcgagagaagatggtactggcaagagagcaatga

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