Parastagonospora nodorum: SNOG_02875
Help
Entry
SNOG_02875 CDS
T01161
Name
(RefSeq) hypothetical protein
KO
K07466
replication factor A1
Organism
pno
Parastagonospora nodorum
Pathway
pno03030
DNA replication
pno03420
Nucleotide excision repair
pno03430
Mismatch repair
pno03440
Homologous recombination
pno03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SNOG_02875
03420 Nucleotide excision repair
SNOG_02875
03430 Mismatch repair
SNOG_02875
03440 Homologous recombination
SNOG_02875
03460 Fanconi anemia pathway
SNOG_02875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pno03000
]
SNOG_02875
03032 DNA replication proteins [BR:
pno03032
]
SNOG_02875
03400 DNA repair and recombination proteins [BR:
pno03400
]
SNOG_02875
Transcription factors [BR:
pno03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
SNOG_02875
DNA replication proteins [BR:
pno03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
SNOG_02875
DNA repair and recombination proteins [BR:
pno03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
SNOG_02875
MMR (mismatch excision repair)
SNOG_02875
DSBR (double strand breaks repair)
HR (homologous recombination)
SNOG_02875
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
CDC24_OB3
DUF223
DUF4503
Motif
Other DBs
NCBI-GeneID:
5970325
NCBI-ProteinID:
XP_001793468
UniProt:
Q0UZD9
LinkDB
All DBs
Position
Unknown
AA seq
578 aa
AA seq
DB search
MEPKAGDANPVQRFRVVLSDIRNFIQTMIATTANDIVTSGQLKKGSIVRLVKYNPQQVKD
KNILIIMELEVLSQYGELDKIGQPEALDTKSDPPQPAAISGNNFYGSKQPPAPQPQRNLP
VHQSNPATSSHPHLYPIESLSPYAHKWTIRARCTNKSDMKEWHNAKGTGKLFSVNLLDDT
GEIRATAFTEAAEKLFPVFEVGTVYYISAPCRVTLAKKQFSNLPNDYELQFEKDTEVEKA
EDQDNKPQIRFNFTKIGDLNSVEKDTTIDTVGVLKEVAEVNTITSKNTNKDFSKRELTLA
DDSQTSVRLTIWGKTAETFDAPLESIIAFKGVKVSDFGGRSLSLLSSGSMMVDPDIDEAH
KLRGWFNAVGQNATFSTHQNMAGASGGSSKNENKLISQCIEEETYLQDTPSYMSLKASVV
YVKNTTVAYPACSTAGCNKKVIEENPGSWWCEKCQQSFPEPNYRYVLSVNVADHTGTLWL
SCFDEAGQSIVGMSANEAMKIKVDDEENNTQNFMTAMQEATCKTFNFRVRAKMETYQDQP
KPRYQVMNMYPLNYAQEANKLAQLIKQYDTNEDSLFVN
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggagcccaaggccggcgatgcgaaccccgtgcagcgcttccgcgttgtgctgagtgac
attcgcaatttcatccagaccatgattgctaccaccgcgaacgatattgtcacgtctggg
caactgaagaagggttcaattgtgagacttgtcaagtacaacccacaacaagtcaaggac
aagaacatcctcatcatcatggaactcgaagtcctttcacagtatggcgaactggacaag
atcggccagccagaagcgctagacacgaaatccgaccctcctcagcctgctgcaatctcg
ggcaacaacttctacggctcaaagcagccaccagcacctcagccgcaacgcaatctccct
gttcaccagagtaaccccgcaacatcctcgcatccgcatctgtaccccatcgagtcgcta
tcgccatacgcacacaagtggaccattcgtgcacgatgcaccaacaagagtgacatgaag
gaatggcacaatgcaaaaggcaccggcaagcttttcagcgtaaacttgctcgacgacact
ggcgaaattcgagccacagcctttactgaagctgctgagaagctgtttcctgttttcgag
gtaggtacggtctactacatctccgcgccatgcagagtcacacttgcgaagaagcaattc
tcaaacttaccaaacgactacgagctgcaatttgagaaggataccgaagtggagaaggct
gaagaccaggacaacaaacctcagatccgcttcaacttcaccaagattggtgatctcaac
tcagttgagaaggacacgacgatcgacacagtcggtgttctcaaggaggtcgctgaagtc
aacacgattacgtcgaagaacacaaacaaggacttcagcaagcgcgagttgacgttggca
gacgacagtcagacatcggtgcgtctcaccatttggggcaagacggctgaaaccttcgac
gccccgctggaatcaattattgcattcaagggcgtcaaagtctctgatttcggtgggcgg
agtctgagtctgttgagctctggctcgatgatggtcgatcctgatatcgacgaggcacac
aagctccgaggatggttcaacgctgttggccaaaatgccaccttctccacacaccagaat
atggccggagcgtctggtggctcttcgaagaacgagaacaaactcatctcacagtgtatc
gaggaagagacctacttgcaagacacaccttcctacatgagcttgaaagcgtctgtcgtg
tacgtcaagaacaccacagttgcttatccggcatgttccacagccggctgcaacaagaag
gtcatcgaagagaatccaggctcctggtggtgtgagaaatgccaacagagtttcccggag
cctaactaccgctacgtgctgagcgtcaatgttgctgatcacaccggcacactctggctc
agctgtttcgacgaagctggccagagtatcgttggcatgtccgcaaatgaagctatgaag
atcaaggtggatgacgaggagaacaatacgcagaacttcatgactgccatgcaggaagca
acctgcaagacattcaactttcgggtacgagcgaaaatggagacgtaccaggatcagccc
aagcctcgctatcaagtcatgaacatgtatccgctcaactacgcacaagaagcgaacaag
ctcgcccagctcatcaaacagtacgatacaaacgaggacagcttgtttgtgaactag
DBGET
integrated database retrieval system
