Parastagonospora nodorum: SNOG_03051
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Entry
SNOG_03051 CDS
T01161
Name
(RefSeq) hypothetical protein
KO
K18995
ATP-dependent RNA helicase DHX29 [EC:
5.6.2.6
]
Organism
pno
Parastagonospora nodorum
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pno03012
]
SNOG_03051
Enzymes [BR:
pno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
SNOG_03051
Translation factors [BR:
pno03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
SNOG_03051
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
HA2_C
OB_NTP_bind
AAA_22
HA2_N
ABC_tran
nSTAND3
ATPase
AAA_23
NPHP3_N
RsgA_GTPase
Rad17
AAA_19
AAA_29
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
5970497
NCBI-ProteinID:
XP_001793640
UniProt:
Q0UYW3
LinkDB
All DBs
Position
Unknown
AA seq
1278 aa
AA seq
DB search
MAKKKKPAGNPARGFATTSVASKPKPEKMTGDATATEAVPSVSKESAPAIVSAPQIVTAP
NVAKAEVVQTPEELEAQLERDELQLLVEKHAPKVRRDSHRNVLKFQTDRRVLRGQSHSMT
VHDWLPNEVLDSVIALAQAESNDSNRRQGPQSLLKILTEEDAMSKLWTLDLTLRELGFSS
DHVLPVLKWICANAAAVDSSASIWGLQEALEWLALDHCDGHSFSYEEPAPKRSATEIAER
SRPNDADNEAQKDGAVSNGARRPDQTSANASNAGDKMSEHIDIDVSDLDSDIELDDLIPT
YLKLKGKLYEIDPSLVEATTRKQTKAGKGKNTPANQIQQSPTVRKLLSQLQKITSDTLFD
EYEAELQWPAKRNQIAQEKVADPGEAEDEGDLLGSMFSAVPDVLDTSKAEDKSTVSENVT
LRDFGKSSGLTPRRLLEEAVRSSESYISTAALFSISVAIPKEEKVYLRLPSNWRELYREF
MDHRKTRIDTADRDAVKHYRSIVLDQIENDESDGVVLTSRFRMRNQAANLPVSGFRDEIM
TTIDKNQITIICGETGCGKSTQIPSFILEHELSQGKACKVFCTEPRRISAISLAQRVSEE
LGEGPKELGTMRSLVGYAIRLESKTSSQTRLVYATVGVVLRMLESAGGLPEVTHLVIDEV
HERRQTQYLEDAIELTHYDGSSEKTQLDGRSSDDDDGEITSDKSGIPSKLPGYSPATRNV
LSTYDEYAIDYGLIARLIEAVAYDPQLSRYSNAVLVFLPGIAEIRQVNDLLGGHPSFNNK
DWLIYPLHSTISSEDQQAAFLIPPRGVRKIVLATNIAETGVTIPDITCVIDTGKHKEMRF
DERRQLSRLTQSFISRANAKQRRGRAGRVQEGLCFHLFTKYRHDTLMTDQQTPEMLRLSL
QDLVMRTKICKLGDIEETLSQALDPPSSRNIRRAIDALIEVDALTPSEELTALGRQIAKL
PLDAHLGKLVLLATIFACVDVAITIAAILSSKSPFLTPFGAKQRADIARLAFKKGDSDLL
TTYNAYRAWRAVCTTPGRSEIQFCHKNFLSPQNLGNIEDLKAQLLSSLVEAGFIQLSPDE
RNNLKRYRSTTRHRAFVQVPPQYDIHTDNDIFVNSVIATAFYPKILTREGKGWRNISNNQ
TVSLAPTSVNKGTKVAQFLSYYHIMQSSNKFYNAHSTSIVYPLPMVLMVAADMDFKMHAG
VISFPGSVLRFAVRDWRAAVALKVLRRRVKEILSSCWKNPARLMSEREKEWLGLFFAVFE
GKWEREERIRQRAGGAAK
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaagaagaagcccgcgggcaatcccgcgcgagggttcgcaacaacttcggtg
gccagcaagcccaagccggaaaagatgacgggtgacgccaccgcgacagaagctgtacca
tcagtttccaaggagagtgcaccagccattgtatctgcccctcagatcgttacagcgccc
aacgtggcaaaggcagaggtcgtgcaaactccagaagaactagaagcgcagctcgagcga
gatgagctgcagctgctggtggaaaagcatgcgccaaaggttcgccgcgattcgcatcgt
aatgtcttgaagtttcagaccgatcgtagagtgcttcgcggacagtctcactcaatgact
gtgcacgattggctaccaaatgaagttttggacagcgttattgcgttagcccaagccgag
tccaacgactcaaatcggaggcaaggccctcagtctctgctcaaaatcttgactgaagag
gatgccatgtccaaactctggacgcttgatctcactctacgcgagctcggtttctcaagc
gatcatgttctaccagttttgaaatggatatgcgctaatgctgccgctgttgactcttcc
gcaagcatttggggtttacaagaggcactagaatggctggcgctagatcattgcgatggt
cattctttctcatatgaagaaccagcgcccaagcgttcagctacagaaattgctgagcga
tctcggcctaatgatgcagacaacgaagctcagaaagacggagcagtctcgaatggtgct
aggagacctgaccaaacaagcgccaatgcatcgaatgccggagataagatgtcagaacac
atcgatattgacgtcagtgatctggatagtgacatcgagctggatgatctgatacccact
tatctaaaactcaaaggcaagctttatgaaatcgaccctagtctggttgaagccacaaca
cgaaagcagaccaaagccggaaagggcaaaaatacacccgcaaaccagattcagcagagt
cctacggtgcgaaagctcctttcacagctacagaagataacctcagacacgctctttgac
gaatatgaggcagagttacagtggccagcgaaacgcaaccagatcgctcaagagaaggtt
gccgaccctggcgaggctgaggacgaaggggatctactaggtagcatgttctctgcggtg
cctgacgttttggacacaagcaaagctgaggataagagtactgtgtccgaaaatgtcacg
ttacgggattttggcaagtcgagtggcctgactccacgaagactgctggaagaggctgtt
cgctccagcgagagctatatttccaccgcggcactattttcaatctccgtggccataccc
aaggaggagaaggtttatttgcgactaccttcaaactggagagaactgtaccgagagttc
atggaccatcgcaagaccagaatcgacaccgcggaccgagatgcggttaagcactatcgc
tcaattgttttggatcagatagaaaacgatgagtctgatggtgtcgtactcacgagccgc
tttaggatgcggaaccaagctgcgaatttaccagtctccgggttccgagatgaaataatg
actaccatcgacaagaaccaaatcacgatcatttgtggagagactggttgtggaaagagt
acacaaatcccctccttcatccttgagcatgagctctcacaaggcaaagcttgcaaggtc
ttctgcaccgagcccaggcgtatctcggctatctcacttgcacagcgtgtgagcgaagag
ctcggtgaggggccaaaggaactgggtacaatgcgctccctggttggttatgcaattcgc
ctagaatcgaagacgtcttcccagacgcggcttgtctacgcgaccgttggtgttgttctg
cgcatgttggagtctgcaggaggtcttccagaagtcacgcatcttgtgatcgatgaggtg
catgagcgaaggcaaacccagtatttggaggatgcgattgaattaacacattacgatgga
tcttctgagaaaacccagctagatggccggagtagcgatgacgacgacggagaaatcact
tccgacaagtctggcatcccgagcaaacttcccggttacagccctgctactcgcaacgta
ctctctacctacgatgaatacgctatcgactatggccttatcgcacgcttgattgaagca
gttgcttacgacccacaactcagtcgatacagcaatgcagtgttggtcttccttcctggt
attgctgagattcgtcaggtcaacgaccttctcggcgggcacccttcgttcaacaataag
gactggctcatctacccacttcactccaccatatcaagtgaggaccaacaggccgctttt
ctcattccaccacgaggtgtgcgaaagattgtccttgccacaaatattgccgagactggt
gtcactatcccagacattacttgcgtgattgacacgggcaaacacaaggaaatgcgattc
gatgagcgcagacagctgtcccgcttaacacaatcattcatctcgagggcgaacgctaag
cagcgtcgcggtcgtgctggccgtgtgcaagaaggactgtgttttcatttgttcaccaag
taccgtcacgatacgctcatgactgatcagcaaacaccagagatgctccgactatctttg
caagaccttgtcatgcgtactaagatctgcaaacttggcgatattgaggagacactttca
caagctttggatccgccctcttcacgaaacatccgtcgcgcaatcgatgcgctcatcgag
gtggacgcgctcacgccgagcgaagagttgacagcccttggccggcagattgcaaagctt
ccgctcgatgcacatttaggaaagctggtgctactggccaccatcttcgcctgtgtagac
gtcgccatcaccatcgctgccatattgtcctccaagtccccgttcctgacgccatttgga
gcaaagcagcgcgctgacatagcacgtctggcgttcaagaagggtgactctgatcttctg
accacatataacgcctacagagcctggcgtgcggtttgcaccacgccaggtcgctccgaa
atacagttctgccacaagaactttctcagtccacagaatctgggtaacattgaagatctg
aaagctcaattgctctcctcactggtagaagcgggtttcattcaactctcacctgatgag
cgtaacaatctcaaacgctaccgcagcaccactcgtcaccgcgcctttgtgcaagttccc
ccacaatacgacatccacacagacaacgacatcttcgtcaactccgtcatcgccacggct
ttctatcccaagatactcacacgtgagggcaaaggatggcgcaacatctccaacaaccag
accgtcagcttagctcctacgtccgtcaacaaaggcaccaaagtcgcacagttcctatcc
tactaccacatcatgcaatccagcaacaagttctacaacgcacactcgacctcgatcgtg
tacccgctccccatggtactcatggtagcagcagacatggatttcaaaatgcacgccggc
gtcattagctttccgggcagtgtgttgcgcttcgcagtcagggactggagagcggcggtg
gcgctgaaggtgctgagacgccgcgtcaaggagattttgtcgagctgttggaagaatcct
gcgaggctgatgagtgagcgggagaaggagtggttgggcttgttctttgcggtgtttgag
ggcaagtgggagagggaggagaggattcgtcagagagcggggggtgcagcgaagtag
DBGET
integrated database retrieval system
