KEGG   Parastagonospora nodorum: SNOG_03055
Entry
SNOG_03055        CDS       T01161                                 
Name
(RefSeq) hypothetical protein
  KO
K24755  WD repeat-containing protein 76
Organism
pno  Parastagonospora nodorum
Brite
KEGG Orthology (KO) [BR:pno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pno04121]
    SNOG_03055
   03036 Chromosome and associated proteins [BR:pno03036]
    SNOG_03055
   03400 DNA repair and recombination proteins [BR:pno03400]
    SNOG_03055
Ubiquitin system [BR:pno04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     SNOG_03055
Chromosome and associated proteins [BR:pno03036]
 Eukaryotic type
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    SNOG_03055
DNA repair and recombination proteins [BR:pno03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     SNOG_03055
  DSBR (double strand breaks repair)
   Other DSBR factors
    Others
     SNOG_03055
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WDR55 WD40_RFWD3 Beta-prop_RIG_2nd Beta-prop_WDR75_1st WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_NUP159_NUP214 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd
Other DBs
NCBI-GeneID: 5970501
NCBI-ProteinID: XP_001793644
UniProt: Q0UYV9 A0A7U2F2N6
LinkDB
Position
Unknown
AA seq 519 aa
MARGKNVELSEYERKRQENIAKTQALLRNLEMEAAEAGLGPTGKSRAAASSKPRVKKPAP
KKIKQEDIAPRRTSSRLKGIEADSEKAKRKAEDEYVAIKEADRAKRQRVSDAFNFSDIVV
AGKDWNRSGNFLSIGPANPYERTFDFDDVKETTDKELRALREKMSGLQLWEDFEPNEIKI
TPERIYAMGMHPTTEKPLVFAGDKLGNLGICDASQKVAEVKQEDDEDADNEGPTITTLKP
HTRTIHTFQFSPHDSNALYSASYDSSVRKLDLAKGVAVEVYGPSDPNEDQPLSGLEISKD
DANTLYFSTLDGRFGIYDMRTPSDQAELFQLSEKKIGGFSLHPQQPHLVATASLDRTLKI
WDLRKISGKGDSRLPALVGEHESRLSVSHAAWNSAGQVATASYDDTIKIHDFSKSAEWAT
GTALTDADMKPSVVVPHNNQTGRWVTILRAQWQQFPQDGVQRFCIGNMNRFVDIYTAKGQ
QLAQLGGDGITAVPAVAKFHPTLDWVAAGTASGKLCLWM
NT seq 1560 nt   +upstreamnt  +downstreamnt
atggcgcgtggcaagaacgtggagctcagcgagtatgagcgcaagcggcaggagaatatc
gcgaagacgcaggcgttgctgcgaaatttggagatggaggctgccgaagctggtctaggt
ccgactggaaaatcaagagcggctgcatcgtcgaagccaagagtcaagaagcccgcgccc
aagaagatcaaacaggaggacatcgcgcctaggcgaacttcgtcgcgtttgaaaggcatt
gaggcagacagtgagaaggcgaagcgcaaggctgaggacgaatatgttgcgatcaaggag
gctgatcgcgcaaaacggcaacgcgtcagcgacgctttcaacttcagtgatattgtcgtt
gctggcaaggactggaatcgaagcggaaacttcttgtctattgggcccgcgaacccgtac
gagcgaacattcgatttcgacgatgtaaaagagaccacggacaaagagctaagagcgctc
agggagaagatgagcggcttacagctgtgggaggactttgagcccaacgaaatcaaaatc
acaccggagcgcatatatgcgatgggcatgcatccgacaacagagaaaccacttgtcttc
gcaggtgacaaattagggaacctaggcatatgcgatgcgtcgcagaaagttgcggaagta
aagcaagaagacgacgaagacgccgataacgaaggtcccaccatcaccaccctgaaacct
cacacacgcacaatacatacattccagtttagtccgcatgactcaaatgcactctactct
gcgtcttatgactcctcagtccggaaactagacctagccaaaggcgtggctgtcgaagtc
tacgggccatcggatccgaatgaagaccagccgttgtccggtttagaaatatccaaagac
gacgcaaatacgctttatttctccacgctcgacggcagattcggaatctatgacatgcgc
acaccttcggaccaagcagagctctttcaactgtccgagaagaagattggaggcttcagc
ctgcatcctcagcaaccacatctcgtagccaccgcctctctagaccgcactctgaagatt
tgggacttgcgaaagattagtgggaagggtgattcgcggctcccagcacttgtgggcgag
cacgagagcagactgtcagtttcgcatgctgcgtggaactctgcgggccaggtagccacc
gcatcatacgatgataccatcaagatccacgatttcagcaaatcggcagaatgggctaca
ggtactgctttgactgatgctgatatgaagccatcagtcgttgtgccacataacaatcag
acgggccgttgggttaccatattacgagcgcagtggcagcaattccctcaagacggcgtg
cagcggttctgcatcggcaacatgaaccgatttgttgatatttataccgcaaagggccag
caattggcgcaactgggtggggatggcatcactgcggtgccagcagttgcaaagttccat
cctacgctggattgggttgctgctggcactgccagtggaaagctgtgcttatggatgtag

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