Parastagonospora nodorum: SNOG_03257
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Entry
SNOG_03257 CDS
T01161
Name
(RefSeq) hypothetical protein
KO
K11701
helicase required for RNAi-mediated heterochromatin assembly 1 [EC:
5.6.2.5
]
Organism
pno
Parastagonospora nodorum
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pno03036
]
SNOG_03257
Enzymes [BR:
pno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
SNOG_03257
Chromosome and associated proteins [BR:
pno03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
RDRC (RNA-directed RNA polymerase complex)
SNOG_03257
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
AAA_30
Viral_helicase1
DEAD
ResIII
PhoH
AAA_16
SLFN-g3_helicase
UvrD-helicase
RuvB_N
nSTAND3
Motif
Other DBs
NCBI-GeneID:
5970684
NCBI-ProteinID:
XP_001793827
UniProt:
Q0UYA7
LinkDB
All DBs
Position
Unknown
AA seq
1142 aa
AA seq
DB search
MAKKHWRQNGPSQQGARSSAGRVRTFAQANPNNMYAGIADAEQYDGEVNAHLTERFGRAS
IRESTAVPDDNIPTSAPARINNDIREYMKLARKPVIAGPWVDRPEVPSSSEILPPRKPGF
LSTDLQPLIDVGGGIRPHRAEGAYGSIEEYLGTTYELLSEDSNRPLREAVEEVRQSPYKD
ESEYESKSIGIYEPVYITGVVLPLRGGFATRVAFSLSRVKKFIRWEQIDDAFKTICILAT
VAARPLSALGQNPPEIDLFFARPEEQEIDPMKKWMMVECRSSFFEASRHTLMALQHMMRE
PFPLSEHLVEVNKDVGPPAYVKHNPFVNLSSLVSMEESAAFENINVLDEWPAPSLLSLDK
SQSKALNHMLTKKLAIVQGPPGTGKTHVSVVMLKVLRDNLRRDDSPIIITAQTNHAVDQI
LRHTKEFEPNFIRLGGRSKDTDIKKRTLFEVRRSVPPQKQPGSQKNQATSALRKLANEIQ
MLLTPLEANKAPLDHRVLLRLGLFTPEQAKSLEIDSQSTMGISPVDNPGILMEQWLGRCL
APCERPSQPDDYSWGYEEEDFEVEQILEMEAEAVAQDDDDIEALRGPYILLSDNYRGKGD
SKLTVDGIRKLLQTTDDLTTIPAMDRGAIYNFFKREVKAFLLTEVRKLAKVYNEQIEQRK
IGAWEEDVRLLSEQRIIGCTTTGLSKYRALISALRPRIILVEEAAETMEAPVTAACLPTL
EHLILVGDHQQLRPHTQVKAFEDEPYYLNLSLFERLVRNEVTYSTLTRQRRMIPEIRRLL
APIYENTLKDHASVEDLANRPPVEGMGGTNSFYFCHEWPESRDGNQSTLNEQEAKMITGF
VDYLVLNGVEAPKITLLTFYNGQRKRLLRECRNHQNSQAFAGIKVVTVDGYQGEENDIVI
LSLVRSNHHHKIGFLSSDNRACVALSRAKRGFYIFGNAELLACESRVWARVVDIMYKDSK
VQVKSGQKRRVGYNLPLQCTAHNRKIWIEDPADWDEIHGGCDRKCGGTLPCQHKCPYRCH
PFGHDQINSAPGGSNEKWSTYVNGGVAADDARYMQKRKDEAQNLELIRNTPPTAGPSSNP
RKLIEISPEKKAISGNANLLIDLDLDLGTAPNPSHAPHSWAKAASSNKKGKAPAKANMSL
LD
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaaagcactggcggcagaacgggccctcacagcagggagctcgcagttcagct
ggcagagtgaggacttttgcgcaggcaaacccaaataacatgtatgcgggcatagctgac
gcagagcaatatgatggcgaagttaatgcgcatctcaccgagcgcttcgggcgcgcctcc
attcgcgaaagcactgcggtcccggacgacaacataccaacctcagcacctgctcgcatc
aacaacgacatccgcgagtatatgaaactggcgcgtaagccagtcattgctgggccatgg
gtcgacagacctgaggtgccaagctcatccgagatactgccaccccgtaagcctggtttc
ctcagcaccgacctgcagcctctgatcgacgtcggtggaggtatacgtccgcacagagct
gaaggagcctatggcagtatcgaggaatatctaggcaccacatacgaactcctcagcgaa
gactccaaccggccgctgcgcgaggctgtcgaagaggtacgccaatcgccatacaaggac
gaatcggagtacgagagtaaaagcatcggcatatacgagcctgtctatattacaggtgta
gttctccctctgcgcggcggatttgctactcgtgtcgctttttcactctcgcgggtgaag
aaattcatccgatgggagcagattgatgatgcattcaagactatttgcatcctcgctact
gtcgcggcgcgtccactgtctgctcttggtcagaatccacctgagatcgatttgttcttc
gcaaggcctgaggaacaagagattgatccaatgaagaagtggatgatggtcgagtgtcgt
tccagcttcttcgaggctagcaggcacacgctgatggccttgcagcacatgatgcgcgag
ccatttcccttatcggagcatttggtcgaggtcaacaaggatgtcgggcctccagcctac
gtcaaacacaaccccttcgtcaaccttagctctttagtcagcatggaggagagcgcagct
ttcgagaacatcaatgtcctcgacgaatggccggcaccctcgctattgtcgttagataaa
tctcagagcaaggctcttaaccacatgctcacaaagaagcttgcaatcgtccaaggaccg
cctggaactggaaagacccatgtcagcgttgtaatgcttaaagtgctccgcgacaatcta
cggcgagacgattcacctatcatcatcaccgctcaaacaaatcacgccgttgaccagatc
cttcggcacaccaaggagtttgagcccaactttatacgtctcggaggacgaagcaaagac
acagatatcaaaaagcggacactgttcgaggtgcgacgcagtgtaccaccgcagaaacag
cctggcagccaaaagaaccaggcaactagtgcgctccgcaaactcgcaaacgagattcag
atgctcttgacgcccctggaagccaacaaagctccgcttgaccaccgcgtcttattgcga
cttggtttgtttaccccggaacaggccaagtcacttgagatcgactcgcaaagcaccatg
ggcatatcgccagtagacaacccaggaattctgatggagcaatggctgggaagatgcctt
gctccgtgcgaacggccaagtcaacctgatgactatagttggggttacgaagaagaggac
ttcgaagtcgagcaaatcttggagatggaggctgaagctgttgctcaagacgatgatgac
atcgaggcacttcgtggtccctacatcctgctcagcgacaactacaggggtaaaggagac
tccaaattgactgtggatgggattcgcaagctactccaaacgaccgacgatctcacgact
attcctgctatggatcgaggcgccatctacaatttcttcaagcgcgaggtcaaagcgttc
ctactcacagaggtacggaagctagccaaggtgtacaacgagcagattgagcaacgcaaa
atcggcgcatgggaagaagacgttcgactcctgagtgaacagcgaatcattgggtgcacg
acgaccggactgtccaaataccgtgctttgatatctgctctacgtccccgcattattctg
gttgaagaggcagcagagaccatggaggccccagtcactgcagcttgcttgcccacactc
gaacaccttatccttgtgggtgaccatcagcaactgcgaccgcacacccaggttaaggcg
ttcgaggacgagccctactacctgaacctgagtcttttcgagcgtctcgtccgcaacgaa
gtcacgtacagcacacttactcgtcagcgacgaatgattcctgagatccgacggctcttg
gctcccatttatgaaaacactttgaaggaccatgcgagcgttgaggatctggccaaccga
cctcctgtcgaaggcatgggtggcaccaactcattctatttctgccatgagtggccggaa
tcgcgcgatggcaatcagtccactctcaacgagcaagaggcaaagatgatcacgggcttc
gtcgactaccttgttctcaatggggtagaagctccaaagattacgctgcttaccttttac
aatgggcaaaggaaacgcctacttcgcgaatgccgtaatcaccagaactctcaggctttc
gctggtatcaaggtcgtgactgtcgatggttatcagggcgaagagaatgacattgtcatt
ctcagtctcgtgcgtagcaaccaccaccataagatcgggttcctttcctctgacaatcga
gcttgtgttgctctgtcgagagccaagcgtggcttctatatcttcggcaatgctgagcta
cttgcatgtgaaagccgtgtatgggcacgcgtcgtcgatatcatgtacaaagactcaaaa
gtccaggtcaagagtggtcagaagcgccgtgtcgggtacaatctcccactccaatgtaca
gcacataaccgtaagatctggattgaagacccagccgattgggatgagattcatggtggt
tgcgaccgaaagtgtggcggaactcttccatgccaacacaagtgtccataccgctgccac
ccgttcggtcacgatcagatcaactcggctccgggtggttcgaatgagaagtggtcaaca
tatgtcaacggaggcgttgctgccgatgatgctcgttacatgcagaagaggaaggacgag
gctcagaacctggaacttatccgtaacaccccgcctactgccggtccatcttcgaacccg
agaaaactcatcgaaatttctccggagaagaaggccatatcaggaaatgccaatctgctc
atcgatctcgacctggatctaggaacggcgcctaatcctagccacgcgccgcattcgtgg
gcaaaggccgcctcgtcaaacaagaaaggaaaggctccggctaaagcgaacatgagtttg
ctagattag
DBGET
integrated database retrieval system
