KEGG   Parastagonospora nodorum: SNOG_03577
Entry
SNOG_03577        CDS       T01161                                 
Name
(RefSeq) hypothetical protein
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
pno  Parastagonospora nodorum
Pathway
pno03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pno00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    SNOG_03577
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pno03009]
    SNOG_03577
Ribosome biogenesis [BR:pno03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    SNOG_03577
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st EIF3I WD40_MABP1-WDR62_2nd WDR55 Utp13 Beta-prop_EML_2 Beta-prop_SCAP Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_TEP1_C WDR90_beta-prop_4th ANAPC4_WD40 Beta-prop_EIPR1 NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_RIG_2nd Beta-prop_SPT8 WD40_MABP1-WDR62_1st Beta-prop_RIG_1st Beta-prop_WDR19_1st Beta-prop_DCAF12 Beta-prop_NOL10_N Ge1_WD40 WD40_RFWD3 Beta-prop_WDR11_2nd PROPPIN Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 5970997
NCBI-ProteinID: XP_001794134
UniProt: Q0UXD7
LinkDB
Position
Unknown
AA seq 773 aa
MRIYSVAPSDTDEGTLDLELLRTLRPHTSPVVTLAVDRTGTLVATGGADGIVKVWDIRAG
YTTHTFHGHGGVVSALHFFEVQVARQDDTSDNSKKRKRTKSQQEETQAVAGAGEYSIEFR
LASGAEDGKIRVWDLHKRKSAAVLDSHVSVVRSLQYSPKTQMLVSGSRDKTVILWSADRW
KVSRTIAALEGVESAGFIGDGDYIYSGGENGCVRLWSVTSGSEITQEQEAGFETDSIVDV
LHHAALPYLISVHADQVLNFHSLPEFESLDASTTVEPLSIFRRVSGTHDEVIDMAYVGRD
KSMLALNTNSEDIRIVTLNESTVPGDATQGRYFGADVGLLKGHEDIVICLDVDWSGHWLV
TGAKDNTARLWRLDPENDSYTCAAVLTGHAESLGAIALPHTVPQESSAAYLDPLSHPPAY
IITGSQDRTVKRWDVTKEMKQKLRAKYTRKAHDKDINAIDIDPSGTLFASASQDRTVKIY
SATEGEAIGVLRGHRRGVWTVKFAPKNSQVPNSGSKGLIATGSGDKTVKIWSLTDYSCLL
TLEGHSNSVLKLAWLPYRPVDARDKRGPQVASAAGDGLVKVWDSESGETMSTLDNHTDRV
WALVAHPTTGSLVSGGGDSVITFWQDTTSATLEAATTAEMERVELDQKLQNFAYAGNYRE
AIVLALQMDQPGRLLSLFKSVIETEKPDEGSMTGLAAVDDVLGNLADEQLYKLLLRLRDW
NTNVRTAPIAQKILWTVVKSYPASRLAGLRPAGKVAAKGSLEGCPWMPSRAYK
NT seq 2322 nt   +upstreamnt  +downstreamnt
atgcgcatatactctgttgctccctcagacaccgacgaaggaaccctcgatctcgaactc
ctccggacgttgcgaccacacacatcgcctgtcgtaaccctggctgtcgaccgcactgga
acattggttgctactggtggcgcagatggcatcgtcaaagtctgggacattcgcgctggg
tatacgacgcacaccttccatgggcacgggggcgtagtttcggctttgcatttctttgag
gtccaagtagctcgacaggacgacacatcagacaacagcaagaagaggaagcgaacaaag
tcacaacaagaagagactcaggctgtggcaggcgcaggagaatacagcatcgagttccgg
ctagcatctggtgcggaagacggcaagattcgcgtttgggatttgcacaagcgcaaaagc
gctgcagtcctagattctcatgtctcagttgtgcgctcgctgcaatactcgcccaaaacg
cagatgcttgtgtctggaagcagagacaaaactgtaatactctggagcgcggatcgatgg
aaggtttcacggacgattgcagctctggaaggcgtggaaagtgcgggcttcattggcgac
ggcgactacatctactctggcggcgagaacggctgcgtgagattatggtcggtcacctct
ggaagcgaaatcacacaagagcaagaggcaggcttcgagactgattcgattgttgatgta
ctgcatcacgctgcattgccgtacctcatttcagtccacgcagatcaggtcctgaacttt
cattccctaccagaattcgagtcgttggacgcaagcacgactgtcgagcccctatctatc
tttcgacgcgtttccggcacgcatgacgaagtcatcgacatggcatatgttggtcgggac
aagtcgatgcttgctctgaacaccaactcagaggacatccgaatagtgaccctcaacgaa
tccactgtaccgggtgatgcgacccaagggcgatactttggcgcagatgtgggattgttg
aagggccacgaggacattgttatttgcttggatgtggactggtcgggtcactggcttgtg
acaggcgcgaaggacaacacagcacggttgtggagattggaccccgaaaatgactcatac
acgtgtgccgctgtgctcactggtcatgccgaatcccttggagctattgcattgccacac
actgtaccacaggagtcttcggcagcttacttggatccattatcacaccctccagcgtat
atcattacgggatcgcaagatcggacagtgaagaggtgggacgttacgaaggaaatgaag
cagaagctacgagccaagtatacacgtaaagcacacgacaaggacatcaacgccatcgat
atcgacccgtcaggaacacttttcgcctctgcatcacaagatcgcacagtcaagatatac
tctgctaccgagggagaagccattggtgtgctcagaggccatcgtcgtggtgtgtggact
gtcaagtttgcgccaaagaattcacaggtacccaactccggcagtaaaggcctgatcgct
accggaagtggagacaagacggtcaagatctggagtctgacagactacagctgtcttctg
accctggagggtcattcgaacagtgtcttgaagcttgcctggctaccttaccgaccagtc
gatgcgagagacaagcgaggcccacaagtcgcttctgcagctggagatggtctcgttaag
gtctgggactcagaatctggcgagaccatgtcgacgcttgacaaccacaccgatcgtgta
tgggcgctagtggcacaccctactacaggctcactagtctcgggaggtggtgacagtgtc
atcactttctggcaagacacgacgagtgcaacactagaagcagcgacaaccgctgaaatg
gagcgtgtagagcttgatcagaaattacagaactttgcgtatgcgggtaactaccgcgag
gccatcgttcttgcgctacagatggaccaacctggccgcttgctctcgctgtttaagagt
gtaatcgagactgagaagccagatgagggaagcatgactggtcttgctgccgtcgacgat
gtactaggcaaccttgcagacgagcagctgtacaagcttctcctacgcctgcgcgattgg
aacaccaatgtccggaccgcacccattgcgcagaagattttgtggacagttgtcaaatcg
tacccagcatctagattggcaggcttgagacccgcaggcaaggttgctgcaaagggcagc
ttggaaggatgtccttggatgccatcccgagcgtacaagtga

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