KEGG   Parastagonospora nodorum: SNOG_03789
Entry
SNOG_03789        CDS       T01161                                 
Name
(RefSeq) hypothetical protein
  KO
K03008  DNA-directed RNA polymerase II subunit RPB11
Organism
pno  Parastagonospora nodorum
Pathway
pno03020  RNA polymerase
pno03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pno00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SNOG_03789
  09124 Replication and repair
   03420 Nucleotide excision repair
    SNOG_03789
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pno03021]
    SNOG_03789
   03400 DNA repair and recombination proteins [BR:pno03400]
    SNOG_03789
Transcription machinery [BR:pno03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     SNOG_03789
DNA repair and recombination proteins [BR:pno03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      SNOG_03789
SSDB
Motif
Pfam: RNA_pol_L_2 RNA_pol_L
Other DBs
NCBI-GeneID: 5971198
NCBI-ProteinID: XP_001794335
UniProt: Q0UWS5
LinkDB
Position
Unknown
AA seq 203 aa
MNAPDRRPSKTAWKDGATAPCWSPKIGALIEHDPNCGLRDATKDNRFVSHKADHDAECRF
ELFLLDDGQQKIEYKEETRKSTYHPALPSDTQANPTTLGVPNTGIFTFNKEDHTLGNLIS
QRLLKYPYITFSAYKVPHPLFATFELRVSTDGSITPKDAIIACCRQVVQDLEDLKRSFQT
EWLGKKIVSEGEQERVAREQNNF
NT seq 612 nt   +upstreamnt  +downstreamnt
atgaacgcgcctgacagacgtccgtccaagacggcgtggaaggatggcgcaactgcgccc
tgctggagccccaagatcggtgcactcatcgagcacgacccgaactgtggactccgcgac
gcgaccaaggacaaccgttttgtgtcgcataaagctgaccatgacgccgaatgtagattc
gagctcttcctcctcgacgacggccagcagaagatcgagtacaaagaggagacgcgtaag
tccacctaccaccccgccctcccctcggatactcaagctaatcccacaaccctaggcgta
cccaacaccggcattttcaccttcaacaaagaggaccacacgctcggcaacctcatctcc
cagcgcctcctcaagtacccatacatcaccttctccgcctacaaggtcccccatccattg
ttcgcgacctttgagctccgtgtctcgaccgacggcagcatcacacccaaggacgccatc
attgcgtgctgcaggcaagtcgtccaggacctcgaagacctgaagcgcagcttccagacg
gagtggctcggcaagaagattgtcagcgagggcgagcaggagcgcgtggccagggagcag
aacaacttctag

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