Parastagonospora nodorum: SNOG_03958
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Entry
SNOG_03958 CDS
T01161
Name
(RefSeq) hypothetical protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
pno
Parastagonospora nodorum
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pno03019
]
SNOG_03958
03041 Spliceosome [BR:
pno03041
]
SNOG_03958
03036 Chromosome and associated proteins [BR:
pno03036
]
SNOG_03958
Enzymes [BR:
pno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SNOG_03958
Messenger RNA biogenesis [BR:
pno03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
SNOG_03958
mRNA cycle factors
Common to processing body (P body) and stress granule
SNOG_03958
Spliceosome [BR:
pno03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
SNOG_03958
Chromosome and associated proteins [BR:
pno03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
SNOG_03958
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
5971364
NCBI-ProteinID:
XP_001794501
UniProt:
Q0UWA6
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MNSARFDGPPPGQMNGGGNWANANAQAFTPRGRDGPQGGGGWGGAAPGKFDPSAYGKPGG
GGGGSARGSGDGQWKDGKHVPGPSNPRVERELFGVPNDPSKQQTGINFEKYDDIPVEASG
QGVPEPVTRFTNPPLDDHLLSNIELSGYKVPTPVQKYSIPIVMGGRDLMACAQTGSGKTG
GFLFPILAQAFQNGPSPPPTAQAGGYGRQRKAYPTSLILAPTRELVSQIFDEARKFAYRS
WVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLASIKYLVLDEADRML
DMGFEPQIRRIVEGEDMPPTAGRQTLMFSATFPRDIQMLARDFLKEYIFLSVGRVGSTSE
NITQKIEYVEDADKRSVLLDILHTHGAGLSLIFVETKRMADSLSDFLINQGFPATSIHGD
RTQREREKALEMFRSGRCPILVATAVAARGLDIPNVTHVVNYDLPTDIDDYVHRIGRTGR
AGNTGIATAFFNRGNRGVVRDLLDLLKEANQEVPSFLESIAREGSGFGGGGGRGGRGGGR
GRGNAATRDVRRMGGGGGAGGFGGGGWGGAPQGGYGGGYGGAPAGGYAPPSGGAYGGGGG
GGGGGGYGGGYGNPSGPGGNSWW
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtgctcgcttcgacggaccccctccaggccagatgaacggcggcggcaactgg
gctaacgccaacgcccaagctttcacaccccgcggacgcgacggtccccagggcggcggt
ggctggggcggtgctgcgcccggaaagttcgacccctcagcatacggcaagcctggtggt
ggcggaggaggttctgcccgtggctcaggcgatggacaatggaaagacggcaagcacgtt
cccggtccctcaaacccgcgtgttgagcgtgagctctttggcgtgcccaacgacccctct
aagcagcagactggtatcaacttcgagaagtacgatgatattcccgtggaggcctccggg
cagggtgttccggagcctgttacccgcttcaccaacccgcccctcgacgatcacctgctg
agcaacatcgagctctcgggctacaaggtccccactcccgtgcaaaagtactcgattccc
atcgttatgggtggtcgtgatctgatggcctgtgcgcaaactggttccggaaagactggt
ggttttctcttccctatcctggctcaggctttccaaaacggccctagtcctcctcctacc
gctcaggctggcggatacggacgtcaacgcaaggcttatcccacgtcattgatcctggcc
cccactcgcgagttggtctcccagattttcgatgaggcgcgcaagtttgcctaccgatct
tgggtccgaccctgcgtcgtctatggtggtgcagacattggctcgcagctccgccagatc
gagcgtggttgtgatcttctcgtggccactcctggccgtcttgttgaccttattgagcga
ggccgcatttctcttgcgagcatcaagtacctcgttctcgatgaggctgatcgtatgctg
gacatgggtttcgagcctcagatccgccgcattgtcgagggcgaggacatgcctcctacc
gccggccgtcagacgctcatgttttcagctactttcccccgcgatattcagatgctggca
cgtgacttcttgaaggagtacatcttcctttccgttggccgtgttggttccacatctgag
aatatcacccagaagattgagtatgtggaggatgctgacaagcgctccgtactgctcgat
attctacacacccatggtgcgggtctgtccctgatcttcgtcgagacgaagcgcatggcg
gactccctctccgacttcctcatcaaccaaggcttccctgctacctctatccacggcgac
cgtactcagcgtgagcgcgagaaggctttggagatgtttcgatcaggtcgctgcccaatt
ctggtggccaccgctgttgctgctcgaggacttgacatcccaaatgtcactcacgtggtc
aattatgacctgcccaccgacatcgatgactatgttcaccgcattggtcgtactggtcgt
gccggaaacactggtatcgctaccgctttcttcaaccgtggcaaccgcggtgttgttagg
gaccttctcgatctgctaaaggaggcgaatcaggaagtgcctagcttcctcgagagcatt
gcccgtgaaggctctggatttggtggtggtggcggccgaggtggtcgtggcggaggccgt
ggcagaggcaatgccgcaactcgcgatgtccgtcgcatgggcggtggaggaggcgccggc
ggcttcggcggaggaggctggggcggcgcaccgcaaggtggctatggaggtggctacggc
ggtgcccccgctggtggctatgcacccccctctggaggagcctacggtggtggtggcggc
ggcggcggcggaggtggttatggtggaggctacggtaacccatccggccccggcggcaac
tcctggtggtag
DBGET
integrated database retrieval system
