KEGG   Parastagonospora nodorum: SNOG_04209
Entry
SNOG_04209        CDS       T01161                                 
Name
(RefSeq) hypothetical protein
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
pno  Parastagonospora nodorum
Pathway
pno03020  RNA polymerase
pno03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pno00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SNOG_04209
  09124 Replication and repair
   03420 Nucleotide excision repair
    SNOG_04209
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pno03021]
    SNOG_04209
   03019 Messenger RNA biogenesis [BR:pno03019]
    SNOG_04209
   03400 DNA repair and recombination proteins [BR:pno03400]
    SNOG_04209
Transcription machinery [BR:pno03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     SNOG_04209
Messenger RNA biogenesis [BR:pno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     SNOG_04209
DNA repair and recombination proteins [BR:pno03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      SNOG_04209
SSDB
Motif
Pfam: SHS2_Rpb7-N S1
Other DBs
NCBI-GeneID: 5971500
NCBI-ProteinID: XP_001794632
UniProt: Q0UVK5
LinkDB
Position
Unknown
AA seq 188 aa
MFFLKELEKTIQLHPSYFGPLIRSHIHRELLQKEEGSSTGKYTIVCILDAFDISDGKVLP
GSGHAEYIVHYKAIVWRPYKGEVMDGVVTSVLRTGFFVDCGSLQAFVGRNVRMPCASCRY
PSTNTTQMIPSDITFDANATPPQWTDNGEQVIEKGTNIRIKIKGLRSEVDKMFAVGTMKE
DYLGPLPQ
NT seq 567 nt   +upstreamnt  +downstreamnt
atgttcttcctcaaagagcttgagaagacaatccagctgcatccgtcgtatttcggcccc
ctgattcggtcgcacatccatcgcgaactgctgcagaaggaggagggctcgagtacagga
aagtacaccattgtgtgtatactagacgccttcgacatctcagacggaaaagtgctgcct
ggatccggacatgctgaatacatcgtgcactacaaagccatcgtgtggcggccgtacaag
ggcgaggtgatggacggcgtagtcacctcagtcctccgtaccggtttcttcgtggactgt
ggctcgctgcaagcattcgtaggacgtaacgtaaggatgccatgcgcctcatgcaggtac
ccgtcgactaacaccacgcagatgatcccatcagacatcacatttgacgcaaatgctaca
ccaccacaatggaccgacaacggtgagcaagtcatcgaaaagggtaccaacattcgcatc
aaaatcaagggtctccgatcggaggttgacaaaatgtttgccgtcggcaccatgaaggag
gattaccttggccctctaccccaatag

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