Entry |
|
Name |
(RefSeq) hypothetical protein
|
KO |
K03015 | DNA-directed RNA polymerase II subunit RPB7 |
|
Organism |
pno Parastagonospora nodorum
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:pno00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SNOG_04209
09124 Replication and repair
03420 Nucleotide excision repair
SNOG_04209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:pno03021]
SNOG_04209
03019 Messenger RNA biogenesis [BR:pno03019]
SNOG_04209
03400 DNA repair and recombination proteins [BR:pno03400]
SNOG_04209
Transcription machinery [BR:pno03021]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
SNOG_04209
Messenger RNA biogenesis [BR:pno03019]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
SNOG_04209
DNA repair and recombination proteins [BR:pno03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
SNOG_04209
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
188 aa
MFFLKELEKTIQLHPSYFGPLIRSHIHRELLQKEEGSSTGKYTIVCILDAFDISDGKVLP
GSGHAEYIVHYKAIVWRPYKGEVMDGVVTSVLRTGFFVDCGSLQAFVGRNVRMPCASCRY
PSTNTTQMIPSDITFDANATPPQWTDNGEQVIEKGTNIRIKIKGLRSEVDKMFAVGTMKE
DYLGPLPQ |
NT seq |
567 nt +upstreamnt +downstreamnt
atgttcttcctcaaagagcttgagaagacaatccagctgcatccgtcgtatttcggcccc
ctgattcggtcgcacatccatcgcgaactgctgcagaaggaggagggctcgagtacagga
aagtacaccattgtgtgtatactagacgccttcgacatctcagacggaaaagtgctgcct
ggatccggacatgctgaatacatcgtgcactacaaagccatcgtgtggcggccgtacaag
ggcgaggtgatggacggcgtagtcacctcagtcctccgtaccggtttcttcgtggactgt
ggctcgctgcaagcattcgtaggacgtaacgtaaggatgccatgcgcctcatgcaggtac
ccgtcgactaacaccacgcagatgatcccatcagacatcacatttgacgcaaatgctaca
ccaccacaatggaccgacaacggtgagcaagtcatcgaaaagggtaccaacattcgcatc
aaaatcaagggtctccgatcggaggttgacaaaatgtttgccgtcggcaccatgaaggag
gattaccttggccctctaccccaatag |