Parastagonospora nodorum: SNOG_04209
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Entry
SNOG_04209 CDS
T01161
Name
(RefSeq) hypothetical protein
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
pno
Parastagonospora nodorum
Pathway
pno03020
RNA polymerase
pno03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SNOG_04209
09124 Replication and repair
03420 Nucleotide excision repair
SNOG_04209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pno03021
]
SNOG_04209
03019 Messenger RNA biogenesis [BR:
pno03019
]
SNOG_04209
03400 DNA repair and recombination proteins [BR:
pno03400
]
SNOG_04209
Transcription machinery [BR:
pno03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
SNOG_04209
Messenger RNA biogenesis [BR:
pno03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
SNOG_04209
DNA repair and recombination proteins [BR:
pno03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
SNOG_04209
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
Motif
Other DBs
NCBI-GeneID:
5971500
NCBI-ProteinID:
XP_001794632
UniProt:
Q0UVK5
LinkDB
All DBs
Position
Unknown
AA seq
188 aa
AA seq
DB search
MFFLKELEKTIQLHPSYFGPLIRSHIHRELLQKEEGSSTGKYTIVCILDAFDISDGKVLP
GSGHAEYIVHYKAIVWRPYKGEVMDGVVTSVLRTGFFVDCGSLQAFVGRNVRMPCASCRY
PSTNTTQMIPSDITFDANATPPQWTDNGEQVIEKGTNIRIKIKGLRSEVDKMFAVGTMKE
DYLGPLPQ
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgttcttcctcaaagagcttgagaagacaatccagctgcatccgtcgtatttcggcccc
ctgattcggtcgcacatccatcgcgaactgctgcagaaggaggagggctcgagtacagga
aagtacaccattgtgtgtatactagacgccttcgacatctcagacggaaaagtgctgcct
ggatccggacatgctgaatacatcgtgcactacaaagccatcgtgtggcggccgtacaag
ggcgaggtgatggacggcgtagtcacctcagtcctccgtaccggtttcttcgtggactgt
ggctcgctgcaagcattcgtaggacgtaacgtaaggatgccatgcgcctcatgcaggtac
ccgtcgactaacaccacgcagatgatcccatcagacatcacatttgacgcaaatgctaca
ccaccacaatggaccgacaacggtgagcaagtcatcgaaaagggtaccaacattcgcatc
aaaatcaagggtctccgatcggaggttgacaaaatgtttgccgtcggcaccatgaaggag
gattaccttggccctctaccccaatag
DBGET
integrated database retrieval system