Parastagonospora nodorum: SNOG_04220
Help
Entry
SNOG_04220 CDS
T01161
Name
(RefSeq) hypothetical protein
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
pno
Parastagonospora nodorum
Pathway
pno03013
Nucleocytoplasmic transport
pno03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SNOG_04220
03015 mRNA surveillance pathway
SNOG_04220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pno03019
]
SNOG_04220
03041 Spliceosome [BR:
pno03041
]
SNOG_04220
Messenger RNA biogenesis [BR:
pno03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
SNOG_04220
Spliceosome [BR:
pno03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
SNOG_04220
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
5971508
NCBI-ProteinID:
XP_001794640
LinkDB
All DBs
Position
Unknown
AA seq
372 aa
AA seq
DB search
MALSIDQKRLKATKFPPEFDKKVDIEKVNIDLMKKWIANKITTILGDEDDIVVETCYNLL
EQDRFPKIKEIQIQLTGFLNKDTPAFCKELWDLMLSAQESPVGVPRELLEAKKLELQKEQ
IVPNAPNALNVDAAVAFAAMTAEEVVEGEVEISIADHHAGVRGLHRASIRQTIEECILTC
TGDDDPHHHVANVTFTSRAGAVVEVAAGEAVVTSLVSAVARFQAVALLLHHLVAFDAHPL
QIAHEHRPDDDADRHHRAGLDHRRRAVHDALPLWVRGLRHDGGGTSPGLQAMIAEGYPNI
PRALPPQQRKTSPTHHHPGCHDRVHARLRVAVEGLLAAHQVPFETGAVDTRLPKRIRMAH
APTSRSASFQLV
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcagcatcgaccagaagcgtctcaaggcgactaagtttccacctgagttcgat
aagaaggtcgacattgaaaaggtcaacattgacttgatgaagaagtggatcgccaacaag
atcacgaccatcctcggcgacgaagacgacattgtagtcgagacatgctacaacctcctt
gagcaagatcgatttcccaaaatcaaggagatccagatccagctcacgggctttctgaac
aaggacacaccggcattctgcaaagagctatgggacctcatgctgagtgcacaggaaagt
cccgtcggtgtaccgcgggagctgttggaagcgaagaagctcgaactgcagaaggaacag
atcgtcccgaacgctccgaacgccctgaacgtggacgcggcggtcgctttcgcggcgatg
accgcagaggaggtggtcgagggcgaggtagagatttcgatcgcggaccaccacgccggg
gttcgcggtctccaccgtgcgtcgatccgtcagaccatagaagagtgcatactgacctgt
acaggcgacgacgatccccaccaccacgtcgcgaacgtgacatttacgtcccgggcggga
gcggtggtagaagtcgcggccggggaggccgtcgtgacaagtctcgtgagcgccgtcgct
cgctttcaggcagtcgctctgcttctccaccacctcgtcgcattcgacgctcaccctctt
cagatcgctcacgaacaccgccccgacgacgacgccgatcgccatcatcgagccggtcta
gatcaccgccgccgcgccgtgcacgacgctctccctctctgggttcgaggtctccgccac
gacggaggagggacaagtcctggtctccaagccatgatagcagaaggttacccaaacata
cctcgcgctctgcctccccagcaaagaaagacaagtccaactcaccaccacccaggctgt
cacgatcgcgttcacgcacgcctccgcgtcgccgtcgaaggtctcctagcagctcaccaa
gtcccgttcgagaccggcgccgtagacactcgtcttccgaagcggattcgcatggctcac
gcgccgacatcaagaagcgcaagctttcagttagtatga
DBGET
integrated database retrieval system