Parastagonospora nodorum: SNOG_04483
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Entry
SNOG_04483 CDS
T01161
Name
(RefSeq) hypothetical protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
pno
Parastagonospora nodorum
Pathway
pno03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SNOG_04483
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pno03041
]
SNOG_04483
Spliceosome [BR:
pno03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
SNOG_04483
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
PRP4
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_DCAF4
WDR54
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_WDR35_TULP_N
WD40_like
Nbas_N
PROPPIN
Motif
Other DBs
NCBI-GeneID:
5971768
NCBI-ProteinID:
XP_001794900
UniProt:
Q0UUT1
LinkDB
All DBs
Position
Unknown
AA seq
500 aa
AA seq
DB search
MNIHPSRQAYVEEEDGVNGAMEGIDYANVRGGNEQASTLMEEFDRKRRAAALIVPTADRD
VKAKLRSRGEPITLFGEGPADRRDRLRSLLADAAEALGEDAADVEMQEADGAPGDEQEEF
YTQGTPTLLDARRDMARYSLPRAKDRIAYQRREATIPLKTHIEFRNKIKDRLKGFELYGS
QTADRPVSIVRVSPNGQYVAYGTWGGKVALLEIPSLEQKKAYRGGHTERATGIDWMPAMS
RLPSANFASGGAGGKVQLWSLDEDKPLRTLEGHTDRVCRVAFHPSGQYLASASDDTTWRL
WDVNTGQELLTQEGHSKEVYTVSFNGDGSLVASAGLDSIGRVWDIRTGRVIYMLESHIKP
IYGLDWNADGHRLLSGSGDGFMKCWDVRAMRESNSIAANTGGVTDLKWFKGTDGPNSGVP
IQENAEGELTPKKASTFVVSSGFDKNIQIFSADDWAHCKTLQGHSGPVFSTDVTSDAAWI
VSGGKDRTIKLWSRDDNEGI
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaacatacatccgtcgcggcaagcttatgtggaggaagaggatggcgtgaacggtgct
atggagggcattgactatgccaatgtccgaggaggaaacgagcaggcgtccaccttgatg
gaagagttcgaccgaaaaagaagagctgcagcgttgatcgtacccacggcggatcgcgat
gtcaaagcgaagctgcgctcgagaggggagccaataacactttttggtgaaggacctgca
gacagacgcgacaggctgagatcactgttggcagatgccgcggaagctctgggtgaggat
gcggcagatgtggaaatgcaagaggcggacggggcacctggtgacgaacaggaggagttc
tacactcaaggcacgccaacactgctcgacgcgcgacgcgatatggcgcgctattcacta
ccacgagccaaagatcgaatcgcataccaacggcgcgaagccacgattccgctcaagaca
cacatcgagttccgtaacaagatcaaagatcgcttgaaaggattcgagctatacggctcc
cagactgcggaccgacccgtcagtatcgtacgagtttcgccaaatggccagtatgttgct
tatgggacgtggggcggaaaggtagcccttcttgagatacctagtttggagcaaaagaag
gcatatcgtggcggtcacacggaaagagcaacgggaatcgactggatgccagcaatgtct
cgacttcccagcgcgaactttgcgtcaggtggagcgggaggaaaagttcaactgtggtca
cttgacgaggacaagccgttgcgtaccttggagggccacactgaccgagtgtgtcgcgta
gcattccacccatcaggccagtatctcgcctcggcctctgatgacacaacctggcgtctt
tgggatgtgaatacaggccaggaattgctcacacaggaaggccactcaaaggaggtctac
accgtgagcttcaacggagatggttccctggtggcctctgcaggtctcgacagtattggc
cgcgtctgggatattcgaaccggacgtgtcatctacatgctagaaagccacatcaagccc
atctatggcctggactggaatgccgacggccatcgtcttctctcaggctcgggagacggc
tttatgaaatgctgggacgtaagggcgatgagagaatcgaattcaatagcggcaaacaca
ggaggtgtgaccgacttgaaatggttcaagggcaccgatggcccaaatagcggcgtcccc
attcaagagaatgcagagggcgagctcacacctaagaaggcgtcgactttcgtcgtgtca
tctgggtttgacaagaatatccaaatattctctgctgacgactgggcacactgcaagact
ctacaaggtcattctggtccagtcttcagcaccgacgtcaccagtgacgctgcatggatc
gtcagtggaggaaaagatcgtaccattaagttatggtctcgagacgacaatgaaggaata
tga
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