Parastagonospora nodorum: SNOG_04526
Help
Entry
SNOG_04526 CDS
T01161
Name
(RefSeq) hypothetical protein
KO
K06100
symplekin
Organism
pno
Parastagonospora nodorum
Pathway
pno03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
SNOG_04526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pno03021
]
SNOG_04526
03019 Messenger RNA biogenesis [BR:
pno03019
]
SNOG_04526
Transcription machinery [BR:
pno03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
SNOG_04526
Messenger RNA biogenesis [BR:
pno03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
SNOG_04526
U7-dependent histone pre-mRNA processing factors
SNOG_04526
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SYMPK_PTA1_N
Ribosomal_60s
Motif
Other DBs
NCBI-GeneID:
5971809
NCBI-ProteinID:
XP_001794941
UniProt:
Q0UUN8
LinkDB
All DBs
Position
Unknown
AA seq
773 aa
AA seq
DB search
MSAQTIQQLESARSLALGDGRYYPTIIPGVLPIIGYSADNQAVDIQRWGADFIAEAFASP
TWPQDAKETSASSVLATLKDYLEHVDDKSVTKSVVQAAASIYPLVYRHVVSNPNDAQDWQ
LMSAIKSSILRRMDSATPGVRICCIKFLQQAVLVQTPGVVDPRRPDGGDISLALVSRDHP
VIPYASLEAEGLGLLDRLLDIIHGDHRSDKPFDQKLAVLTGYSDGLVVTATLNSLGILMH
RRPIAANKILNSVLNFNALKLANAPMTPKNKVIIKSIERTTRALLVNIMKRHPENQVNGR
IQQYLERMHRTRIEIFDESRKRPAPSGPNDGLEQAKRQRVTVEASTKAPSVPPLPAGEVS
WRQLYTLNPEGKSTVNFDVQMFKDPEQLLRIVVPVLQSVDAQKLDHAINANMSSQIVRSR
YLSLSQAATKQAAAKLAAAPAAEDEEEYEPDFEPEDAEQIVNRLDGYPATDVPQSGPGTA
LAPYKLPEAPPLSEQEVQKYGDQTVYRAFGMLASVDETQKTKANKSGFNRLAATDYGRDA
WVTILSRLATRASAGLDDPESGVKDEYAVKGTKGSTSISEAVRDGIYNYILHDWKRRIDV
AISWLNEEWYNDKVLAQQTTKNGVNGHTPSNNNTKQGNYQRCALRMFDGILGFIEHTDKV
LIRFLSEVPELDHDILSRLKIMARDPERIDLACQTLQYLYMFRPPVRRIVVDTLAELWQE
NDRAKPSARKLLLRWRPEVLGEERSVTPAIKAEGDGQMARDSANGSLEVKAAS
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcccagacgatacagcagttggagtcagcacggtcgctcgcgttaggcgacggt
agatactatcctaccatcataccaggcgtgctccctattatcggctacagtgcagacaat
caggcggttgacatacagcgctggggcgccgacttcatagctgaggcttttgcttctccc
acgtggcctcaggacgcaaaggagaccagcgcgtcctcggtgctcgcgacgttgaaggac
tatctggagcatgttgacgacaagagcgtgaccaaaagcgttgtacaggcggctgcgagc
atatacccgctggtataccgacatgttgtctcgaacccgaacgatgcccaagactggcag
ctcatgtcagcgatcaaatcgagcatcctgcgacgaatggacagcgccacgccaggcgta
cgaatatgctgcatcaagttcctgcaacaagccgtcctcgtgcagacaccaggcgtcgtg
gacccaaggagacccgatggcggcgacatctcccttgccctcgtttcccgcgaccacccc
gttataccgtatgcgagcctcgaagcagaagggctcggactcctcgatcgattgctggat
atcatacatggagatcacaggtcagataagccatttgatcagaaattggcagtgctgaca
ggatacagcgacgggctagttgtaacggcaactctgaacagtctgggcatactgatgcat
cgtcgtccaattgctgcaaacaagatattgaacagcgtgctcaacttcaacgctctgaag
cttgccaatgcccccatgacacccaaaaacaaagtcatcatcaagtcaatagaacgtaca
acacgagctttgcttgtgaatatcatgaagaggcaccctgagaatcaggtcaatgggcgg
atccaacagtatctggagcgcatgcaccgaacgcgcatcgagatctttgatgagtctcgc
aagcgaccagcacctagtggaccgaacgatgggcttgagcaagccaagaggcagcgagtc
actgtggaggcttctaccaaagcgccctctgttccgcctctgccggctggcgaggtcagc
tggcgtcaattgtacacgctcaaccctgaaggcaaaagcactgtgaactttgatgtgcaa
atgttcaaggacccggaacaattgctgaggatcgtcgtacctgtcttgcaatctgtcgat
gcacagaaactcgatcatgctatcaatgctaacatgtcgtcacagattgtccgctctcgt
tatctcagcctcagtcaagctgcaaccaagcaagcggctgccaaattagcggcagctcct
gctgctgaagacgaggaggaatacgaacccgacttcgagcctgaagacgccgaacaaata
gtcaataggcttgacggctatcctgcaactgatgtacctcagtcaggacctggaacagca
ctcgcaccctataaacttccagaggcgccgccgctgtcggaacaggaagtgcagaagtat
ggcgaccaaaccgtctatcgggcatttggtatgcttgcgagtgttgacgaaactcagaag
accaaggccaacaagtcgggattcaaccgtctcgcagcaacagactacggtcgggacgca
tgggtcactatcctgtcgcgactagctacgcgtgcgagtgctggtctggacgatcctgaa
agtggtgtgaaggatgaatacgctgtcaaagggaccaagggcagcacctcaatcagcgaa
gcagtaagggatgggatttacaactatatccttcacgattggaagcggcgcatcgacgtt
gccatatcgtggctcaacgaagagtggtacaatgataaggtactggctcaacaaacgacg
aaaaatggagtgaatggccatactccgtccaataacaacacgaagcaaggcaactaccaa
cgctgcgcgctccgcatgttcgacggcattttgggatttatcgagcataccgacaaggtc
ttgatccgctttttatccgaagtcccagaactcgatcacgatatcctgtctcgcctgaaa
atcatggcaagggatcctgagcgcattgacctggcgtgtcagaccctacaatacttgtac
atgttccggccaccggttcgaaggatcgtggtagacacactggcggagttgtggcaagaa
aacgaccgcgcaaaaccgagcgctcgaaagctgctgcttaggtggcggccagaggtactg
ggtgaggagaggtcagtcacgccggctataaaggctgaaggagacggacagatggcgagg
gatagtgctaatggctcactcgaagtcaaagctgcatcataa
DBGET
integrated database retrieval system