Parastagonospora nodorum: SNOG_04575
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Entry
SNOG_04575 CDS
T01161
Name
(RefSeq) hypothetical protein
KO
K12609
CCR4-NOT transcriptional complex subunit CAF120
Organism
pno
Parastagonospora nodorum
Pathway
pno03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SNOG_04575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pno03019
]
SNOG_04575
Messenger RNA biogenesis [BR:
pno03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
SNOG_04575
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_26
PH
Motif
Other DBs
NCBI-GeneID:
5971858
NCBI-ProteinID:
XP_001794990
UniProt:
Q0UUI9
LinkDB
All DBs
Position
Unknown
AA seq
1262 aa
AA seq
DB search
MIQTYQPPVMEVGADTLPELQRIFTFLNSHSNKLYQEGYFLKFHDTDARGRPAPDRKWQE
YFVQLVGTILSLWDASALDQAGGDAEVLPTFINLTDAAIHMIPSMTLKDGKKLDNILSVS
TAASNKYLFHFDSYHALTQWTAGIRLAMYEHTSLSEAYTGALIAGKGKTLNNIRTLLDRQ
AAPYDDWVRVRFGAGTPWRRCWCVVSPPDQKEYAKLQKTQKKSNVYDKQAVLKGDIKFYD
SKKIKKNTKPIATVKDAYSCYAIYPQSKPLIDQSTLVKIEGKITVHSTPESTTEGFVFVM
PEVRPAISGFEIMLQYLFPVFDTFNLYGRPKKLVADVLDSRGLMFGMPSGRRYGYLEIWD
VVGLINTDGSSTWSERQWRKQLKELTSTRMNSGDSDSPGSRATRRNTVSRTTGAGSMRAN
SLRFDDQGSVRSNPSTRRSSPSRQARVDFEPQGQPRSGTAPAATPFASPRHQRSVSEAQG
YNKYQGVPSRLGNGRGMDGADLPPAPPPHASFNGGPQNGQSHHYREASDSDESPIHDPGN
LPQLPIAPSAPPHGPVDVPPALEHAPYQQPPVRPTLPSAMIPNADVDPATYQQMADASNN
PGIAAAGAAAAWRSQESIQSRRSADYNAYGGDGQQMHLSAPSRPPPTDRNSNSRLATIPA
SPYVEHAEFVQPSSTYEPAAPPVPEHVEMPQQQWREELPYRPHSGSGDGHVQRKPVPGRS
PSPSKEDDARSTNSSNLDSLRNEIVDLEALDALNHQEALLHRQQSTSSSRYDDDDALSSS
TPDYASVASEEIQPRKLPTRAQDRPRSGILRVVGDPNLKLKSDVEEEEASQVVANRHPPS
ADVPAFDFGPTYSLPLEAKRPGTSGTMTQEVHDGSFSRSRENLTLTPNEQRRQSYISGRT
TPNTMLHMRSGSGSANASDSRSVAWQPVTIASQQQQQQQDNRPKLDAEEWVKYRANQSQN
YVYGHGRSTPEPFGGRQRSGDWTHLQRTPEGSPGAVRPPSRPLSRPQSMGADAILDYRPT
SLSAQEQEQVARMTGTPLLSGVTKHKKQQPSQGLTGYIDSREKEKAAAKAARIGHSPAMQ
AEIDRRLLAQQQKQVAEAQVRQRQMLEMHQQQQLQMQANMAQSQYAYGSYAGAPSRAPSV
MGMSVGTPSVMGMPMGTPSVMGMPTGPGTPHGMVGMAYSSPSQAPQQMYQGQGYFQQPMM
TPNTNAMPGGWASPSPQTPQSQYFQQQQMQYGQQQQPATQPYGASFDQAQARQAQQQSYS
RR
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgatccagacataccaaccgcccgtcatggaggtcggcgcagacacgctccctgagctc
caacgcatctttacatttctcaacagtcattccaacaagctataccaagagggctacttt
ctcaagttccacgacacagacgcccgtggccgccccgcgccagacagaaaatggcaggaa
tactttgtccaactcgtgggcaccattctctcgctatgggacgccagcgcccttgaccag
gccggcggcgacgccgaggtgctaccgacgttcatcaacctcacggatgctgcgattcac
atgatcccctccatgactctaaaggacggcaagaagctcgacaacatcctcagcgtatcg
accgcggccagtaacaaataccttttccatttcgactcgtaccatgccctgacgcaatgg
accgctggtatccgccttgccatgtacgagcacacgagtctgtcggaagcgtataccgga
gcactcattgcgggcaagggtaagaccttgaacaacatccgtacgctgctcgaccgtcaa
gccgcaccctacgacgattgggtgcgtgtccgtttcggtgccggaactccctggcgccgc
tgctggtgcgtcgtctctccgccggaccagaaggaatacgccaagctgcagaagacgcag
aagaaatccaacgtatacgacaagcaggcagtcctcaagggcgacatcaagttctacgac
tctaagaagatcaagaaaaacaccaagcccatcgcgacggtcaaggacgcgtactcgtgc
tatgccatctacccgcagtctaagccactcatcgaccaatcgacactggtcaagatcgaa
ggtaaaatcacggttcactccacccccgagagcacgaccgagggctttgttttcgtcatg
cctgaagtgcgacccgcgatcagcggcttcgagattatgctgcagtatcttttccctgtt
ttcgacacattcaacctctacggacgccctaagaagctcgtcgcagacgttttggactcg
cggggtctcatgttcggcatgccttcgggcaggcgctatggctacttggagatctgggac
gtggtcggcctcattaacactgatggcagctcaacctggtccgaacgtcaatggcggaag
cagttgaaggagctcacctcaacccgcatgaactcgggcgactccgactctcctggttct
agggcaaccaggagaaataccgttagtcgtaccaccggcgctggttccatgcgcgccaat
agtctaagattcgatgatcagggctcggtccgctctaatccatccactcgccgctcatct
ccaagtcgacaagcgcgtgtcgactttgagccacaaggccaaccacgctcgggtaccgct
cctgcagcaactccgttcgcgtctcccaggcatcagcgctcggtctctgaggcacagggt
tacaacaagtaccagggcgtgccctcacgcctcggaaatggtcgtggcatggatggagct
gatctcccgcccgcaccaccaccacatgcgtccttcaacggcggtccccagaatggacag
tcgcaccactaccgcgaggcttccgatagtgacgaaagcccaatccacgatccaggcaat
ttgcctcagcttcccatcgcaccgtctgccccgccgcacggaccagtggatgtgccaccg
gctcttgagcatgcgccttaccagcagccacccgttcgacccactctgccatctgccatg
ataccaaacgcggacgtcgaccctgcaacgtatcagcagatggctgatgcctccaacaat
ccaggtatcgcggcagccggtgccgcagctgcttggagaagtcaagagagcattcaaagc
agacgcagcgctgattacaatgcttacggtggcgacggccaacagatgcatctgagcgca
ccctcccggcctccgccaacagaccgtaactctaacagccggctggcgacgataccagca
tcgccctacgtggagcatgctgagtttgtccagccatcatctacatacgaacctgcggct
cctccagtgcctgaacacgtggagatgccgcagcagcaatggcgagaggagctcccgtat
cgtccgcattctggtagcggcgacggtcacgtccagcgaaaaccagtcccaggtcggtcc
ccttctccctcgaaagaggatgacgctcgctcgaccaacagctcaaacctcgacagttta
cgaaacgagatagttgatctcgaagccctcgacgctctcaaccaccaagaagcattgctc
cacagacaacaaagcacatctagtagtcgctacgacgatgacgatgccctctcaagctcc
acccctgattatgcgagcgttgctagcgaggagattcaaccacgcaaactgcccactaga
gctcaggatcgcccccgaagtggcatactgagagttgttggtgaccccaacctcaaactc
aagtctgatgtagaggaggaagaggcttcgcaggtcgtcgccaatcgacacccgccatca
gcagatgtgccagcattcgactttggtcccacgtactctcttcctctagaggccaagcga
cccggtactagtggtactatgacccaagaagtacacgacggcagcttttcgcggtcaaga
gagaatctcacactcactcccaatgagcaaagacgccaatcatacatctccggacggaca
acgccgaatacaatgctgcatatgcggagcggctcgggctccgcaaatgcttcggattcg
cgaagcgttgcttggcagccagtcacgatagcatcacaacaacaacagcagcagcaagat
aacaggccaaagcttgatgcagaagaatgggtcaagtatcgcgcaaatcaatcgcaaaat
tatgtctacggtcatggtcgatccactcccgaacccttcggaggacggcaacgatctggt
gattggacgcatctacagcgtacacctgaaggctctccaggcgccgtccgacctcccagt
cggccgttgagtcgcccacaatccatgggcgccgatgcgattttggattaccggccgacg
tcactgtcagcacaagagcaagagcaggttgctcgcatgacaggcactccattgctgtca
ggcgtcaccaaacacaagaagcagcagccctcgcagggattgaccgggtacattgattcc
cgtgagaaagagaaggctgctgccaaagcggcacgcatcggccactcccccgcaatgcaa
gcagaaatagaccgacgtctacttgctcagcagcaaaagcaggtggccgaagctcaagta
cgccaacgccagatgctcgagatgcaccaacagcagcagttacaaatgcaagcaaatatg
gcacagagccagtacgcatatgggagctacgcaggtgcgccttcccgtgctccgagtgtc
atgggcatgtcagttggaactccaagtgtaatgggcatgccgatgggaactccaagcgtg
atgggaatgccaactggacccggcactcctcacggtatggtgggcatggcgtactccagc
ccgagtcaggctccacagcagatgtaccaaggccaaggttacttccaacagccaatgatg
acgccgaatacgaatgcaatgccaggtggatgggcatcaccttctcctcagacgccgcag
agtcagtacttccagcaacagcaaatgcaatacggacaacagcagcagccagcaacgcaa
ccttacggggcgagcttcgatcaagcacaagcgcgacaagcacagcagcagtcttactct
cgtcgatag
DBGET
integrated database retrieval system
