Parastagonospora nodorum: SNOG_05646
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Entry
SNOG_05646 CDS
T01161
Name
(RefSeq) hypothetical protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
pno
Parastagonospora nodorum
Pathway
pno03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SNOG_05646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pno03019
]
SNOG_05646
Messenger RNA biogenesis [BR:
pno03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
SNOG_05646
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
SNOG_05646
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
WKF
EAD9
Chal_sti_synt_C
DUF4476
Motif
Other DBs
NCBI-GeneID:
5972921
NCBI-ProteinID:
XP_001796044
UniProt:
Q0URG8
LinkDB
All DBs
Position
Unknown
AA seq
603 aa
AA seq
DB search
MAARKLQQEIDKCFKKVAEGVATFESIYEKIMQTGNPSQKEKLEDQLKKEIKKLQRSRDQ
IKTWAAMSEIKDKKPLLDHRKLIETPTDHVQQMERFKAVEKEMKTKAYSKEGLQLASKID
PKDKERMEVVEFLQHMNEELERQIETLEAEAETMQVVGKKSKKADASKAERIAEMEETVE
RHRWHQTKLELLQRALENSSIDTEQVKEIEESIKYYVEENQSPDFMDDDTIYDELNLQEE
EVIFGMGGEMDRVSSQDTQSIQDETPELEGKPSAPETQGRRTDAVRRAKTVDAAQVSITG
VGDIAYAITWYIELSKHYASAAAAAAASDKNGVGIAPLPPPPGGSAAPSGLAPAGARASA
STSPATTHPKLAQTSSEQVQPAQARSPAATPSHPVTAAVEKEALSRAASAEDAVKASRRT
PAPERLEEEGSQAATPPLTNGDSHAEDEEEESVYHLPSSLQDLLDSFEATKNEINASVSK
PPDERMLASSMATAPDSADTEAPRHYQPQNPYPFTPAHYPQEPLPIFDDPRLYQRIETDA
LFYAFYYQQGSFQQYLAAKALKSQSWRFHKQYQTWFQRHEEPKAITEDYEQGTYRFFDYE
STW
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggccgcccgcaagctccaacaggagatcgataaatgcttcaagaaggtcgccgagggt
gtggcgaccttcgagagcatatacgagaagattatgcagacggggaacccttcacagaaa
gaaaagctggaagaccagctgaagaaggagatcaagaagctgcaacggtcgcgagaccag
atcaagacatgggccgccatgagcgagatcaaggacaagaagccgctattggaccacagg
aagctcattgagacacctactgaccacgtgcagcaaatggagcgcttcaaggccgtcgag
aaggagatgaagacaaaggcatactctaaagaggggctgcaattggcgtccaagatcgac
ccgaaagacaaggagagaatggaggtggtcgagttcctgcagcacatgaatgaagagctg
gagcggcagatagagacactcgaggctgaggcggaaaccatgcaagttgtggggaaaaag
agcaagaaggcggacgcatccaaggccgagcgaatagcggaaatggaagaaacagtggag
cgacatagatggcaccaaaccaaattggagttgctacaacgagcgctggagaatagcagt
atcgacaccgagcaggtcaaagagatcgaggagagcatcaagtactacgtcgaggaaaac
caaagtccagacttcatggacgatgacacaatatacgacgaactcaatctgcaagaagag
gaggtcatttttggcatgggtggagagatggatcgcgtgtcatcgcaagacactcagtcg
atacaagacgaaacgcccgagctcgaaggcaagccgtcagcgcccgaaacccaaggtcgc
agaaccgacgcagtcaggcgcgcgaagaccgtcgacgcagctcaagtctccattaccggc
gttggcgacattgcatacgccattacctggtacatcgagctcagcaaacactatgcctcg
gcggccgcggcggcagccgcaagtgacaagaatggagtgggcattgctcctctgccacca
ccaccgggaggatccgcagcaccgtcaggcctagctccagccggcgcacgggcaagcgca
tccacatcgccagcgaccacacatccgaagttggcacaaacgtcaagtgaacaagtacag
ccagcacaggccagatctcccgctgcaacaccaagccatcctgtcactgcagctgtcgaa
aaggaagcgttatcacgtgcggcatcagctgaagatgctgttaaggcaagcaggaggacg
ccggcccccgagcgcttagaggaggagggttcacaagctgccacaccaccgttgacgaac
ggtgattcacatgcagaggacgaggaagaggagtcggtgtaccacctgccctccagcttg
caagatctactcgattcttttgaggcaacgaagaacgaaatcaacgcttccgtttcgaag
ccgcctgacgagcgcatgctagcctcttccatggccaccgcacccgactcggcggataca
gaagccccacgccactatcagccacaaaatccctacccgttcacgcccgcgcactacccg
caggagccactgcccatattcgatgacccacgactgtaccaacggatagaaacggacgcg
ctgttctatgccttctactaccaacaaggctcctttcagcaatatcttgcggccaaagcg
ctgaagtctcagagctggagattccacaagcagtaccaaacatggttccaacggcatgaa
gagccaaaggcaatcaccgaggattatgagcaggggacctacaggttcttcgactacgag
agcacatggtaa
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